| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5384 |
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| Symbol | |
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| ID | 8329586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6398003 |
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| End bp | 6399811 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644945821 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_003103049 |
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| Protein GI | 256379389 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAGA GCTTCGCGAA CTCGCTGGTG GTCGAGGTCG AGGGCGCCCC GCTGCCCGCC
GACGTCAAGT CCTGGCTCAC CACCGCCTAC GTCGACACCA GCCGCAACCT GCCCGACGTG
TTCGTGCTGC GCTTCCGCGA CCCCGGCCAC GTGGTGCTGG GCAAGGGGAA GTTCACCGTC
GGCGCCAAGG TCGTGCTGAA GGTCCAGACC AGCGAGCCGG GCGCGCCCGA GCAGCTGATG
GCGGGCGAGG TGACCGCGCT CGGCGTCGAG CTGGACGCGG GCGGCACGTT CACCGAGGTG
CGCGGCTACG CCGTCACGCA CCGGCTGTTC CGGGGCCGCA GGGTCGCCGC CTACCCCGGC
ATGACCGTGG GCGACGTGGT GCGCAAGGTG GTGCGGCGCG CGAGCCTCGC GCCCGGCCGG
ATCGACGGCG TGTCCGGGTT CGGCGGCAAG GCTGAGACGC AGATCAGCCA GGAGGGCGTC
AGCGACTGGG AGTTCCTGTC CCGCCTGGCC GCCGACGTCG GCGCGCAGAT CGGCGTCACC
GACGGCAAGG TCGACTTCCG GCTGCCCGAG AGGCCCAGCT CCGCGCCGGG CAGCGGCGCG
AAGTCGACCA CGAACCCGTT CGCGCTGGAG ATGCACCGCT CGCTGCTGTC GCTGCGCGCG
TCCGTCACCT CGGCCGAGCA GGTGCCGGAG GTCGTGGTGG GCGGGTGGAA CCCGGAGGCC
AAGGAGAAGG TCACCGCCAC CGCCACGCCC ACCACGCCGG GCACCCAGGC CGACCAGGCC
GACCCGGCGA AGCTGGCCGG GAAGTTCGGC GCGGCCCCGT TCCTGGCGTC GGTGGCCAAC
CGCACCCAGC CCGAGGTGAA GGCCGTCGCC GAGGCGCTGG CCGCCCAGCT CGGCGGCGCG
TGCGTGGAGC TGAGCGGCGT GGCGAGGGGC AATCCCAAGC TGCGCGCGGG TTCCGCCGTC
GCGCTGGTCA ACGTCGGCGA GCAGTTCGCG GGCAAGTACA CGCTCACCAG CGCCCGGCAC
CTGTTCTCCG GCAACGGCTA CACCACCGAG TTCACCGTCT CCGGCCGCCA GGAGCGCTCG
CTGTACGGGC TGGCCAACGG CCCCGCCACG GCCGCGCGCG GCGACCTGGT GCCCGGCATC
GTCAGCGACG TCAAGGACCC GGCGAAGCTC GGCCGGGTCA AGCTGACCTT CCCGTGGCTG
GCTCCCGACT TCACCTCCGG CTGGGCGCGC GTGCTCCAGC AGGGCGCGGG CAAGGGGCGG
GGCTCGCTGG TGGTGCCCGA GGTCGGCGAC GAGGTCCTGG TGGGCTTCGA GCACGGCTCG
TTCGACTCGC CGTACGTGCT CGGCGGCCTG CACAACCCCA AGGACGTGCC GCCGGAGCTG
AGCGTCGACC CGGTGGACGG CGGGGCCGGC GCGATCGCCG CGCGCGGCTT CGTCTCCCGC
GCGGGCCACA GGGTCGAGTT CGTCGAGACC GACGGGATCC TGATCTCCAG CGGTGACGGG
AAGTTCGCCG TCCGCATCGA CCAGAAGAAG CAGACGGTCG AGATCACCAG CGACAAGACC
GTGGTGGTGA AGGCGGCCAA CGGCGTCAGC ATCGACGCGG GCAAGGGGCC GCTGGAGCTC
AAGGGCCAGA AGATCACCGC CACCTCCGCC ACCGACGTCG CCGTCGAGGC CAAGGCCGCC
GTGAAGCTCT CCGGGACCTC GGGCGTGAAG GTCGAGGGCG CCTCGGTGTC CGTCGCCGCC
CGTGGCCAGG CCGAGCTGAC CGCCAGCGGC GTGGTCACCG TGCGCGGCGG CCTCGTCAAG
ATCAACTAG
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| Protein sequence | MAESFANSLV VEVEGAPLPA DVKSWLTTAY VDTSRNLPDV FVLRFRDPGH VVLGKGKFTV
GAKVVLKVQT SEPGAPEQLM AGEVTALGVE LDAGGTFTEV RGYAVTHRLF RGRRVAAYPG
MTVGDVVRKV VRRASLAPGR IDGVSGFGGK AETQISQEGV SDWEFLSRLA ADVGAQIGVT
DGKVDFRLPE RPSSAPGSGA KSTTNPFALE MHRSLLSLRA SVTSAEQVPE VVVGGWNPEA
KEKVTATATP TTPGTQADQA DPAKLAGKFG AAPFLASVAN RTQPEVKAVA EALAAQLGGA
CVELSGVARG NPKLRAGSAV ALVNVGEQFA GKYTLTSARH LFSGNGYTTE FTVSGRQERS
LYGLANGPAT AARGDLVPGI VSDVKDPAKL GRVKLTFPWL APDFTSGWAR VLQQGAGKGR
GSLVVPEVGD EVLVGFEHGS FDSPYVLGGL HNPKDVPPEL SVDPVDGGAG AIAARGFVSR
AGHRVEFVET DGILISSGDG KFAVRIDQKK QTVEITSDKT VVVKAANGVS IDAGKGPLEL
KGQKITATSA TDVAVEAKAA VKLSGTSGVK VEGASVSVAA RGQAELTASG VVTVRGGLVK
IN
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