Gene Amir_5382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5382 
Symbol 
ID8329584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6397264 
End bp6397671 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content71% 
IMG OID644945819 
ProductGPW/gp25 family protein 
Protein accessionYP_003103047 
Protein GI256379387 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTTCA TCGGCAGGGG ACTCGCGTTC CCCGTGCACA CCGACGCCAC CGGCTCCGTC 
GCCCTGGTCA GCGGCTCCCG CGAGATCGTC GAGAGCATCC GCCTGATCCT GGCCACCGCC
CCCGGCGAGC GCCCCATGCG CCCCGAGTTC GGCTGCGCCA TCCACGACCT GGTGTTCGCC
CCCGCCGACT CGGCCACCGC CGGGCGCATC GCCTACGAGG TCCGCACCGC CCTGGAGCGC
TGGGAACCCC GCATCACCCT GGAGGACGTC TCGGTGAGCT TCGACGAGGT GGGCAGCGGA
ACCCTGCTCA TCGACATCCG CTACACCACG CGCGGCACGA ACGACCCGCG CAACCTGGTC
TTCCCGTTCT ACGTCATCCC GCCCCACGAC GCCGAGGACG GTGCCTGA
 
Protein sequence
MDFIGRGLAF PVHTDATGSV ALVSGSREIV ESIRLILATA PGERPMRPEF GCAIHDLVFA 
PADSATAGRI AYEVRTALER WEPRITLEDV SVSFDEVGSG TLLIDIRYTT RGTNDPRNLV
FPFYVIPPHD AEDGA