Gene Amir_5365 details

Gene Information

• Locus tag: Amir_5365
• ID: 8329567
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 6378158
• End bp: 6378817
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644945802
• Product: hypothetical protein
• Protein accession: YP_003103030
• Protein GI: 256379370

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGACGA TCGCGCAGTG GGCCCCCGCA GTGCTCGCCC TGGTCCTGGT GGCCAGTCCG 
GGCGTGTGGC GCTACGCCCG CCACACCATC ACCATCGCCC ACGAGGGCGG CCACGCGCTC 
ATCGCGCTGC TCACCGGCCG CAGGCTCCAG GGCATCAAGC TCAACTCCGA CACCTCCGGC 
GTCACCGTCT CGCGCGGCAG GCCGTCCGGA CCGGGCGTGG TCGCGATGTA CTTCGCGGGC 
TACGTCACCC CGCCGCTGCT CGGCCTCGGC GCCGCGTGGC TGGTCACCGA GGGGCACGTG 
CGCCAGCTGC TGTGGGCGAC GGTCGTCCTG CTGGCCGCCA TGCTGATCAT GATCCGGAAC 
GTCTTCGGCG TGTTCTCGGT GATCCTCACC GGGGGCGTGA TGTTCGTCGT GTCCTTCTAC 
GGGACCGACG ACCTGAAGTC CGGGTTCGCG CTGTTCGTGG CCTGGTTCCT GCTGCTGGGC 
GGCGTGCGCC CGGTGGGGGA GCTGCAGAGC AGGCGGATGC GGGGCAAGGC GCCGCAGTCC 
GACGCCGACC AGCTCGCCCG CATCACCCGC GTGCCGGGGC TGGTGTGGGT GCTGCTGTTC 
GCCGCGGTGG CGATCGGGTC GCTGTTCTAC GGCGGGCAGC TGCTGTTCCC CGAGTTCTAG 

 

Protein sequence

MSTIAQWAPA VLALVLVASP GVWRYARHTI TIAHEGGHAL IALLTGRRLQ GIKLNSDTSG 
VTVSRGRPSG PGVVAMYFAG YVTPPLLGLG AAWLVTEGHV RQLLWATVVL LAAMLIMIRN 
VFGVFSVILT GGVMFVVSFY GTDDLKSGFA LFVAWFLLLG GVRPVGELQS RRMRGKAPQS 
DADQLARITR VPGLVWVLLF AAVAIGSLFY GGQLLFPEF