Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5330 |
Symbol | |
ID | 8329532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6341614 |
End bp | 6342186 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644945768 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003102996 |
Protein GI | 256379336 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAGAT GGGAGCCGAA CGCCCGCGAG CGGCTGCAGC GGTCGGCGCT CGCGCTGTTC GCCGAGCGCG GGTACGACAG CACCACCGCC GCCGGGATCG CCGAGGGCGC GGGGCTGGGC AAGAGCACGT TCTTCCGGCA CTTCGCGGAC AAGCGCGAGG TGCTCTTCGA CGGGCAGGAG CTGCTGAACG AGGCCCTGGT CGCCGCGATC GCCGCCGCGC CGGCCGAGGC CGGTCCGTAC GAGGTGATCG GCCTGGCGCT GGACGCGATG GGCGCGTTCT TCGGGCCGGA GCGGCTGGAG TGGGCGCGGC AGCGGCAGGC CGTCGTGCAG GCGCACAGCG AGCTGCGCGA GCGCGAACTG CTCAAGATCG CCTCGCTCAC CGAGGCGTTC GCCGCCTCGC TGCGGGCGCG CGGGCTGGGC GCGACGGCCG CCGGGGTCGC GGCCGAGCTG GGCGGGCTGG CGTTCCGGGC CGCGTTCGCC GGGTGGATCG ACCCGGACAA CGGGCTGGGG TTCCCGGAGG TGGCGCGGCG GGAGCTCGCG GCGGTGCGGG AGGCGGCGGC CTCGCTCGAC TGA
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Protein sequence | MGRWEPNARE RLQRSALALF AERGYDSTTA AGIAEGAGLG KSTFFRHFAD KREVLFDGQE LLNEALVAAI AAAPAEAGPY EVIGLALDAM GAFFGPERLE WARQRQAVVQ AHSELREREL LKIASLTEAF AASLRARGLG ATAAGVAAEL GGLAFRAAFA GWIDPDNGLG FPEVARRELA AVREAAASLD
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