Gene Amir_5330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5330 
Symbol 
ID8329532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6341614 
End bp6342186 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content76% 
IMG OID644945768 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102996 
Protein GI256379336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAGAT GGGAGCCGAA CGCCCGCGAG CGGCTGCAGC GGTCGGCGCT CGCGCTGTTC 
GCCGAGCGCG GGTACGACAG CACCACCGCC GCCGGGATCG CCGAGGGCGC GGGGCTGGGC
AAGAGCACGT TCTTCCGGCA CTTCGCGGAC AAGCGCGAGG TGCTCTTCGA CGGGCAGGAG
CTGCTGAACG AGGCCCTGGT CGCCGCGATC GCCGCCGCGC CGGCCGAGGC CGGTCCGTAC
GAGGTGATCG GCCTGGCGCT GGACGCGATG GGCGCGTTCT TCGGGCCGGA GCGGCTGGAG
TGGGCGCGGC AGCGGCAGGC CGTCGTGCAG GCGCACAGCG AGCTGCGCGA GCGCGAACTG
CTCAAGATCG CCTCGCTCAC CGAGGCGTTC GCCGCCTCGC TGCGGGCGCG CGGGCTGGGC
GCGACGGCCG CCGGGGTCGC GGCCGAGCTG GGCGGGCTGG CGTTCCGGGC CGCGTTCGCC
GGGTGGATCG ACCCGGACAA CGGGCTGGGG TTCCCGGAGG TGGCGCGGCG GGAGCTCGCG
GCGGTGCGGG AGGCGGCGGC CTCGCTCGAC TGA
 
Protein sequence
MGRWEPNARE RLQRSALALF AERGYDSTTA AGIAEGAGLG KSTFFRHFAD KREVLFDGQE 
LLNEALVAAI AAAPAEAGPY EVIGLALDAM GAFFGPERLE WARQRQAVVQ AHSELREREL
LKIASLTEAF AASLRARGLG ATAAGVAAEL GGLAFRAAFA GWIDPDNGLG FPEVARRELA
AVREAAASLD