Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5324 |
Symbol | |
ID | 8329526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6332870 |
End bp | 6334897 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644945762 |
Product | acyltransferase 3 |
Protein accession | YP_003102990 |
Protein GI | 256379330 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.778856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCTCTG ACGTGCTCGC CCAAGCGCCA CCCCGCCCCG TCGAGGGCAA ACGCCGCTAC CGCACGGAGC TGCAGGGCCT GCGCGCCATC GCCGCCCTGC TGGTCGTCGT GTACCACGTG TGGCTCGGTC GCGTCTCCGG CGGCGTGGAC GCGTTCTTCC TCATCTCCGG CTTCCTCGTC ACCGGCCAGC TCACGAGGAT GGCCGAGCGG GGCGGGGTCC AGTACCGCAC CTACTGGCTG AACACCGCCA AGCGGCTGTT CCCCGCCGCC TCGGCGGTCC TGCTGGTCAC GGTCATCGGC AGCGTCATGT TCCTGCCGGA GCACCGCTGG CCGGTCACCG TCGAGGAGGT CTTCGCCTCG CTGCTGCTGC TGGAGAACTG GCAGCTGACG AGCGCGGCGA CGGACTACTT CAACTCGCAC GTCGAGGCCA GCCCGGTGCA GCACTTCTGG TCGCTGTCCG TGCAGGGCCA GATCTACCTG ACCTGGCCGC TGCTGGTCGG GGCCGCCGCG CTGGCCGCGC GGCACCTGCG CATCAACGCG ACCCGCGCGG TCGCCGTCGT GCTCACCCTG GTGTTCGCGC TGTCCCTGGC GCACTCGGTG GAGCTGACCA ACGCGAACCA GCCGCTCGCC TACTTCTCCA CCACGACCCG CCTGTGGGAG TTCGCCCTCG GCGGCCTGCT GGCGCTGGCG ATCGACAAGG TCGAGCTGCC CGCCAGGCTC CGCCTCGCGC TCGGCTGGCT GGGCGTTCTC ATGCTGGCCT CCTGCGGGAT GCTGCTCCAG GTCGGCACGA TGTTCCCCGG CTGGGCCGCG CTGTGGCCGA CCGTCGCCAC CTCGCTGGTG CTGCTGGCGG GCCACACCGG CAGCCCGATC GGCGCCGACC GCCTGCTGAG CACCCGCCCG CTGCGCTACC TCGGCGACAT CTCCTACAGC CTGTACCTGT GGCACTGGCC GATCCTGGTG CTGTACCTGG TGGCCCGCGA CCGCACCGAG GTCGGCCTGC TGGGCGGCCT GGGCATCATC ACGCTGTCGC TGCTGCTGGC CGCCTTCACG CACCGCTACG TCGAGCGCCC CACCCGCAAG GGCCGGTTCC GCCTGGTCGC GGCGGCCATG GTGCCGGTGA TCGCGGCCAC CGCCGTGTGG CAGCTCACCA GCGACCGGCG GCTGACCGGC TACGTCGCCG AGGTCTCCGA CGACAGCCAC CCCGGCGCGA TCGCCCGCAC CGAGGGCTAC GCGTACGCCG GTGACGACAA CGCCCGCCTG GTGCCGCCGA TGGTGGCCAT GACCGACCAG TGGTCGCTCA TCCCCGGCGC GAGCTGCGAG CGGCCCGACC CGGCCGCCCC GCAGCTGGAG GTGTGCACCG GCCCGGCCGA CGGCGAGCCC ACCAGGAAGG TCGTCATCGT CGGCGACTCG CACGCGCAGC AGTACACCGA GGCGTTCCTG CCCACCGCCG AGCGGCTGAA CTGGCAGCTC ATCACGATGA TCAAGGGCGC CTGCCCGTTC TCCACCGAGT CGGAGACCGT GCGCGGCGAC CGCGACTGCG AGGACTGGAA CGCTGCGGCG GCCGAGCGGA TCGTCGACCT CAAGCCGGAC GCCGTCGTCA CCATGGCCAC CAGGACCATC CGCCTGGACC ACGACGAGGA GACCCCCGAC GGCTTCGTCG CGCAGTGGCG GAACCTGGAG GAGGCGGGCA TCCCCGTCGT CGCCATCCGG GACAGCCCGC GCTACGACTA CTCGCCGTCC GAGTGCGCGG CCCGCTACGG CGCCGAGGAC GAGCGGTGCG TGATGAAGCG CTCCGACCTG CTCGCGCTGA CCATCGGCCC GCCGTACGAG CGGCGCGACG ACATCCCGGC CAACGTCAGC TTCCTCGACT TCACCGACTA CTACTGCACT GCCGACATCT GCCCGCCCGC CATCGGGAAC GTGCTGCTGT ACTTCGACGA CAACCACCTG ACGTCGAGCT ACATGCTCAC CATGAACCCG ATCGTCGAAC CGGCGGTGCT CGGCGCGCTG GGCTGGAACG AGGAGTAG
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Protein sequence | MTSDVLAQAP PRPVEGKRRY RTELQGLRAI AALLVVVYHV WLGRVSGGVD AFFLISGFLV TGQLTRMAER GGVQYRTYWL NTAKRLFPAA SAVLLVTVIG SVMFLPEHRW PVTVEEVFAS LLLLENWQLT SAATDYFNSH VEASPVQHFW SLSVQGQIYL TWPLLVGAAA LAARHLRINA TRAVAVVLTL VFALSLAHSV ELTNANQPLA YFSTTTRLWE FALGGLLALA IDKVELPARL RLALGWLGVL MLASCGMLLQ VGTMFPGWAA LWPTVATSLV LLAGHTGSPI GADRLLSTRP LRYLGDISYS LYLWHWPILV LYLVARDRTE VGLLGGLGII TLSLLLAAFT HRYVERPTRK GRFRLVAAAM VPVIAATAVW QLTSDRRLTG YVAEVSDDSH PGAIARTEGY AYAGDDNARL VPPMVAMTDQ WSLIPGASCE RPDPAAPQLE VCTGPADGEP TRKVVIVGDS HAQQYTEAFL PTAERLNWQL ITMIKGACPF STESETVRGD RDCEDWNAAA AERIVDLKPD AVVTMATRTI RLDHDEETPD GFVAQWRNLE EAGIPVVAIR DSPRYDYSPS ECAARYGAED ERCVMKRSDL LALTIGPPYE RRDDIPANVS FLDFTDYYCT ADICPPAIGN VLLYFDDNHL TSSYMLTMNP IVEPAVLGAL GWNEE
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