Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5284 |
Symbol | |
ID | 8329486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6283907 |
End bp | 6284491 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644945723 |
Product | hypothetical protein |
Protein accession | YP_003102951 |
Protein GI | 256379291 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.550113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGC AGATCCCCAG CTCCGCCACC GCGCCGCAAC CGTTCGGCCG AACGGTGGGC GCGGAGATCG TCCGCCACGC GCGCCAGCAC GCCCACCCGG CCGTGGCCCC GCGCCGCCCG GCGGAGGACG CGGCCCTCGC GGCGCTGCTG CGCGCCCGCC AGCGCAGCGG CGAGGGGCAG CAGTGGAGCA GGCGACCGCA GGAGCCGCCA ACGCGGCCCG CGCAGGCGGA CGTGGTGGAG CGGTTGGCGT CCCGGATAGT CCCGCCCGCG CTGTGGACGG CGGTGGAACC GCTGATCCCG CCCGCGAAGG TGCGGCGGCA GGGGGGTGGT CGCGGGCGCG TGTCGGACCG GGCGGTGTTC ACCGCGATCG CGTTCGTGCT GACGAGCGGG TGCGCCTGGC GGCACCTGCC CGCGACGTTC GGGGTGACGG TGCCGACGGT GCACCGGAGG TTCCAGGAGT GGACCGACAC CGGGTTGTGG ATCAGGCTGC GGCGGATCGC GGAGGAGGGG CGGTTCGAGG ACGCGGACTG GCTGCGGATG ATCGTGGAGG CGGCGGAGCG GCGGGGCACT CGGGCGACCG GATGA
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Protein sequence | MSEQIPSSAT APQPFGRTVG AEIVRHARQH AHPAVAPRRP AEDAALAALL RARQRSGEGQ QWSRRPQEPP TRPAQADVVE RLASRIVPPA LWTAVEPLIP PAKVRRQGGG RGRVSDRAVF TAIAFVLTSG CAWRHLPATF GVTVPTVHRR FQEWTDTGLW IRLRRIAEEG RFEDADWLRM IVEAAERRGT RATG
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