| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5269 |
|---|
| Symbol | |
|---|
| ID | 8329471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 6265354 |
|---|
| End bp | 6266541 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644945708 |
|---|
| Product | Cupin 4 family protein |
|---|
| Protein accession | YP_003102936 |
|---|
| Protein GI | 256379276 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.242855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCTC GGAGCCTGGC CGACCTCGTC GCACCGGACG GGGTCGGCCG CTTCTTCGAG
GCGGTGCAGG GGCGGACCCA CCTCAGGTTC CCCGGCGAGA GGGGCAGGTT CGCGGACCTG
CTGCCCTGGT CCGAGGTCAA CCGGGTGCTG CGGCAGCACC GGTTGGAGTT CCCCAGGTTG
CGGCTGGCCA GGGACGGCGA GGTGGTGCCC GCGCACGTCT ACTCGGAGCT GGTGGACACC
CGGCGGGCCG GGCAGGTGCC GAGGGTGCTG CCGGGGAAGT TCGCCGAGCA GATGCGCGGC
GGGGCGACGC TGGTGCTGGA CTCGGTGCAG GAGCTGGTGG GCGCGGTCGG CGACCTGGCC
GTGGGGCTGG AGCACGAGCT GCGCGAGCGG GTGCAGGTGA ACGCCTACGC CGGGTGGGGC
GTCACGCACG GCTTCGACGT CCACTGGGAC GACCACGACG CGATCGTCGT GCAGGTGTCC
GGGCGCAAGC GCTGGCGCAT CCACGGGTTC ACCAGGGTCG CCCCGATGGT GCGGGACGTC
GAGCTGCCGC CGAGGCCGGA GGGCGAGCCG CTGGACGAGT TCGTGCTGGA GGCGGGCGAG
GTGCTGTACC TGCCGCGCGG GTGCTGGCAC GACGTGTCCG CGGTGGGCGA GGAGTCGTTG
CACCTGACCA TCGGGGTGAA CCGGGCGACC GGGGTGGACC TGGTGGCGTG GCTGGCCGAC
CAGCTGCGGG GCGACGAGGC GTTCCGGGGC GACCTGCCGA GGTTCGGCAC GGCCGCCGAG
CAGGCGGAGC ACGCGGCGCA GCTGCGGGCC GGGCTGCTGG AGCGGCTGGA CGACGGCGTG
GTGGCGCGGT TCCTGGCCGA CCGGGACGCG CAGGCGCCCG CGGTGGAGCA CGTCGGGCTG
CCGTGGACGG CGACCTCGGC GATGATCCCC GAGGACGACG GGGCCGAGGT GCTGCTGCTC
GCGCCGAGGG CGGTGCTCTC GCGCGAGGGC GACGCGGTGG TGCTGGCGGC GGTCGGGAAG
CGGCTGGTGT TCGCGGGCGC GGCGGAACCG GTGCTGGCGG CGCTGCTGGG CGGTCGGGCA
CGCACGGTGA CGTCGTTGGC CGAAGCGGGC GGTCCTGCGC TCGACCGGGT GACTGTGCGG
GCGCTGCTCG GGGAACTCGC GGCCCAGGGG CTGCTGTCAC CGAAGTAA
|
|---|
| Protein sequence | MTARSLADLV APDGVGRFFE AVQGRTHLRF PGERGRFADL LPWSEVNRVL RQHRLEFPRL
RLARDGEVVP AHVYSELVDT RRAGQVPRVL PGKFAEQMRG GATLVLDSVQ ELVGAVGDLA
VGLEHELRER VQVNAYAGWG VTHGFDVHWD DHDAIVVQVS GRKRWRIHGF TRVAPMVRDV
ELPPRPEGEP LDEFVLEAGE VLYLPRGCWH DVSAVGEESL HLTIGVNRAT GVDLVAWLAD
QLRGDEAFRG DLPRFGTAAE QAEHAAQLRA GLLERLDDGV VARFLADRDA QAPAVEHVGL
PWTATSAMIP EDDGAEVLLL APRAVLSREG DAVVLAAVGK RLVFAGAAEP VLAALLGGRA
RTVTSLAEAG GPALDRVTVR ALLGELAAQG LLSPK
|
|---|
| |