| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5262 |
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| Symbol | aroE |
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| ID | 8329464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6259027 |
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| End bp | 6259884 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644945701 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003102929 |
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| Protein GI | 256379269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTTCGG CAACAACTGA CGGCAGGCGG GCGGCCGTGA TCGGCTCGCC CGTCGCCCAC
TCCCTGTCAC CCGTGCTGCA CAACGCGTGC TTCGAGGCGC TCGGGCTGCG CGGCTGGGAG
TACGGCTGGA TCGACTGCCC GGAGGACGGG GTCGCGGAGC TGGTGCGCGG CCTCGGCCCC
GAGTGGGCCG GGTTGTCGGT CACCATGCCG GACAAGCGGG CCGCGCTGGC CGTGGCCACC
GCGCCGTCGC GGACCGCCGT GCTCGTGGGC GCGGCGAACA CGCTCGTGCC GTTCGAGGGC
GGCTGGCGGG CGGAGTGCAC CGACGTGGAC GGCGTGGTCG GGGCGCTGCG GGCGGCGGCC
GGGTTCACCT CCGGCGAGCG CGGGCTGGTC CTCGGCGCGG GCGGCACCGC CACGGCGGCG
CTGGTCGGGC TGGCGTCGGT GGGCGTGCGG TCCGTCGCGC TGGTCGTGCG GGACGTGGCG
CGGGCCGGTG AGGCGGTGGC CTGCGCGGAG CGGGCTGGCG TCGAGCTGGA CCTGGTGACC
TGGGACTCGG CCGACTTCGG CGCGCTGGCG TCGGAGGCGG ACGTGCTGGT CAGCACCGTG
CCACCGGCCG CGACCGAGCC GGTCGCCGAC CTGCTCGCGT CCACGCCCGT CGTGCTCGAC
GTGATCTACC ACCCGTGGCC GACCCCGCTG GCGCTGGCCG TGCGGCGGCT CGGCCGGGAA
CCGGCGACGG GCCTGGACAT GCTGCTGCAC CAGGCGTTCG GCCAGGCCGA GCTGTTCACC
GGCCTGCCCG CGCCGCGCGA GGCGATGCGC GCGGCCCTGC GCGCCGCGAC CGGGAACCTG
CTGCCGCTGC CGGTGTGA
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| Protein sequence | MFSATTDGRR AAVIGSPVAH SLSPVLHNAC FEALGLRGWE YGWIDCPEDG VAELVRGLGP
EWAGLSVTMP DKRAALAVAT APSRTAVLVG AANTLVPFEG GWRAECTDVD GVVGALRAAA
GFTSGERGLV LGAGGTATAA LVGLASVGVR SVALVVRDVA RAGEAVACAE RAGVELDLVT
WDSADFGALA SEADVLVSTV PPAATEPVAD LLASTPVVLD VIYHPWPTPL ALAVRRLGRE
PATGLDMLLH QAFGQAELFT GLPAPREAMR AALRAATGNL LPLPV
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