Gene Amir_5238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5238 
Symbol 
ID8329440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6234290 
End bp6234889 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content74% 
IMG OID644945677 
Productguanylate kinase 
Protein accessionYP_003102905 
Protein GI256379245 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGACG GCACCGGGGC GGGGTCGGGC GTTCGCGCCC GGCCCCGCCT CACCGTTCTG 
TCGGGTCCCT CCGGCGTCGG CAAGTCCAGC GTGCTGGCCG AGCTGCGCGG CAGGGACCCC 
GAGCTGCACT ACAGCGTCTC GGTGACCACC AGGAAGCCGA GGCCGGGCGA GCTGGACGGC 
GTCCACTACC ACTTCGTGGA CGGCGCCGAG TTCGACCGCA TGGTCGACGC GGGCGAGCTG 
CTGGAGCACG CCGAGTTCGC GGGCAACCGC TACGGCACCC CCAGGGCGCC CGTGGAGGCC 
GCGCTGGCGT CGGGCCTGCC CTCCCTGCTG GAGATCGAGC TGCAGGGCGC GCGGCAGGTC 
AGGGCCGCCA TGCCCGAGGC GCGGCTGGTC ATGCTGGCCC CGCCCTCCTG GGAGGACCTC 
GTCGCCCGGC TCACCGGCCG CGGCACCGAG GACCCCGCCG TCGTCGAGCG CAGGCTCGCG 
ATCGCCAGGC AGGAGCTGGC GGCCGAACCC GAGTTCGACG AGGTCGTCGT CAACGACGAC 
GTGCGTTCGG CGGCGACGAA GTTGCTAGAC TTGGTGGTCG GCCCGCTGCC CGGCGCCTGA
 
Protein sequence
MSDGTGAGSG VRARPRLTVL SGPSGVGKSS VLAELRGRDP ELHYSVSVTT RKPRPGELDG 
VHYHFVDGAE FDRMVDAGEL LEHAEFAGNR YGTPRAPVEA ALASGLPSLL EIELQGARQV 
RAAMPEARLV MLAPPSWEDL VARLTGRGTE DPAVVERRLA IARQELAAEP EFDEVVVNDD 
VRSAATKLLD LVVGPLPGA