Gene Amir_5210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5210 
Symbol 
ID8329412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6206655 
End bp6208247 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content73% 
IMG OID644945649 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003102877 
Protein GI256379217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.035838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTGG CCACGCTCAG TGACGGGAGC GAGCCGATGG AAGCGAACGG ACGAAGAGCC 
ACCAGCACCA GGCGCGCGTG CCCGTCCTGC GGGGCGCTGA TAGCCGCCGA CAACTCGGAC
CGGCTCTGCC ACCGGTGCAG GCGCAACGCG CGCGCCGACA TCTACGGGCC CCCCGCCCTG
ACCGAAGAGT TCTGGGACCA CCCCGTGCTG GCCTCCGCGT TCGCGGCCAG GGACATGGGG
GCGGTCCTGG CCGCCTACCG GCACCACCCG CAGCACGTCA GCCGGATCAC CCAGGACCGC
ATGGCCACCT GGCTGGGAAT CAGCCAGGCG CAGCTGTCGC GGTACGAGAC CGGCGAGAAC
CCGATCGACC GGATCGAGCG ACTGCGCCAC TTCGCGCGCG CCCTGAGCAT CCCCGGCGAC
CGGCTGTGGT TCGACCGCGT CGGCATTCCC AGCCAGGCGG CCCCCGAACG CGGGGCGCCG
CCCGATGTGC TCGTCGCAGC GTGGGACGCG TCGAGCATAG CCAGATCGGT CGAGGAAACG
GCGAGGAGCG ACTTGGCGAT CAGCAGACGG GCGGCGCTCA CCGGAGCAGC CGCCGTCACG
ATGGGCCCCA CGCTGGTGGA GCCGCTGCAG CGGTGGTTGC ACCCGCTGCA GCCGCTCACC
AGGTGGTCGT CCAGCGCGGC GATCAGCGAG GAGGAGCTGG CCGCACTGCA GCACGTCGCC
GACGGGTTGC GCGGCTGGGG CGGTCGGGGC GGGTACGGGT TGGCGCGCAA GGCGGTGCTG
GGCCAGCTGG AGGAGCTGGC CGAGCGGCTG ACCAGGGCCC CGGCGGGACC GACGACGGAG
CGGGCGTTCT TCATCGGCGC CGAGCTGTCG AAGGTCGCGG CGAGCATGTC GTGGGACGCG
GGGATGCACG ACGCGGCCCA GCGGTACTAC GTGCTCGGCG TGCGCATGGC CAAGGCCGGG
CACAACGACG CGTTCGCGGC GCTGTGCCTG GCCGCGATGG CCAGGCAGAT GTTCGACCTG
GGGCGGCCCG AGGACGGCCT GGACCTGGTG CAGCTGGCCC AGTACGGGAC CCGCCGCAAG
GCCACGCCGA CCCTGCAGGC GCTGCTGCTG ACCAGGGAGG CGTGGGCGTA CGCGCAGCTC
GGCAGGGTCA AGGAGTTCCA CCGGGCGGTG GGCCAGGCGC AGGACAGCTT CGCCCAGCGC
GAGCACGGTT CCGAGCCCTG GTGGTTGCAG AGCTTCGACG AGGCGGAGTT GGAAGGGGTG
ATCGGGGCCC GGCTGCGGGA CCTGGCGGCG CACGACCCGA GCCAGGCGCT GCTGGCCGAG
AAGCACATCC TGCGGGCGCT GGAGCTGCGC GACCCGGCGC GGGTGCGCAA CCGGGCGTTC
GACGTGATCG GTCTGGCCCG CACCAAGATG GCGGCTGGCG ATCCGGAGGC CGCCTGCGGT
TTGATCCAAC AGGTCCTGCC CACCGCGGTC GGCCTGGCTT CCGGCCGGGT CGTGCGCAAG
CTGCAGGACT TCGCGAAGGA GGCGGAGCGG CACCGGGAAC TCCCGCTGGT GCGCGACACC
CGCGAGGCGA TCCGGGGAGT GCGGACGGCC TGA
 
Protein sequence
MLVATLSDGS EPMEANGRRA TSTRRACPSC GALIAADNSD RLCHRCRRNA RADIYGPPAL 
TEEFWDHPVL ASAFAARDMG AVLAAYRHHP QHVSRITQDR MATWLGISQA QLSRYETGEN
PIDRIERLRH FARALSIPGD RLWFDRVGIP SQAAPERGAP PDVLVAAWDA SSIARSVEET
ARSDLAISRR AALTGAAAVT MGPTLVEPLQ RWLHPLQPLT RWSSSAAISE EELAALQHVA
DGLRGWGGRG GYGLARKAVL GQLEELAERL TRAPAGPTTE RAFFIGAELS KVAASMSWDA
GMHDAAQRYY VLGVRMAKAG HNDAFAALCL AAMARQMFDL GRPEDGLDLV QLAQYGTRRK
ATPTLQALLL TREAWAYAQL GRVKEFHRAV GQAQDSFAQR EHGSEPWWLQ SFDEAELEGV
IGARLRDLAA HDPSQALLAE KHILRALELR DPARVRNRAF DVIGLARTKM AAGDPEAACG
LIQQVLPTAV GLASGRVVRK LQDFAKEAER HRELPLVRDT REAIRGVRTA