Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5160 |
Symbol | |
ID | 8329362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6151901 |
End bp | 6154303 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644945599 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003102827 |
Protein GI | 256379167 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.170469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGTGGA TCGCGGTGGG ACTGGCGGTG GTCGGGGCGG TCTTCTTCGC GCTGGCCGCG CGCCTGCAGC ACGAGGCTGT GCGGGCGGTG GAGGGGCCGC TGCGGGTGGC CGCGCTGCCG GGCAGGCCGC GCTGGCTCGT CGGGCTGGTG CTGATGGTCG TGGGCGCGGG CGTGCACGCG GTGGCGCTGG GCATGGCCCC GCTGAGCGTG GTGCAGCCCG TGGGCGTGCT GGCGATCGGC GTGACCGCCG TGCTCGACCG GCGCTGGGCC CGGCTGCCCG CCGTGCTGGT GACCACGCTC GGCGTCGGCG CGTTCGTGCT GCTCGCGGCG GGCAGCGCCA CCCCGACCGA GGTGCGGCCC GAGGCGGAGC TGCAGGCCGT GCTGGTGTGC CTGGCGCTGC TGGCGGCGGC CGGGCTGGCC GGGGTGATCG CCACCCGGCC CGCGCTGCGC TCCCTGGCGT TCGGCTCGGC GGGCGGCGTC GCCTACGGCT GCGTGTCCCT GCTGATGCGC GCGGTGTCCC AGGACTTCCA GACCGGCGCG CTCGACCTGT CGTCGGCGCT CACGGTGGTG GCCATCGTGG TCGCGCTGCT GGTCGGCGGC TGGTTCATCC AGCACGCCCA CGCGGGCGGC TCGTCGCACC TGGTCGTGGC CTGCCTGACC GCCGTGGACC CGCTGGTCGC GGTGGGCCTG GGCGCGTTCC TGCTCGGCGA GGCCGCCGCC ACCGGCGTCC CGGTCGCACT GGGCCAGCTC GCCGTCGCCG GGGTCGCGGT CGCCGGCGTG GTCGCGCTGG CCCGCGCCGA GCACGACCCG GAGGCCGGGC GCGACCGGCA CGACGACTCC GACCGCGCCG CCACCCGGCG GGCAGCCCCC GACGCCTCCG CCCCCGACAC CCCTGATCAC GGCGGAGCCC ACCCCGCGGG CCCTCGCCGC GCCACCCCGG AGCACCGCAG TCCCGACCAC GGCGGAGCCC ACCCCGCGGG CCCTCGCCGC GCCACCCCAG GGCACCGCAG TCCCGACCAC GGCGGAGCCC ACCCCGCGGG CCCCCGCCCC ACCACCCCGG AGCACCGCGG CGTCCAGCCG CTCCTCACCC CCGCGCGCGA ACGGTCAGCG GACCGGGGCG CGGCTGCCCG CGAGGGCCGT CCCGCGCGGA GGGGCACCAC CACCGGGGGA CCCGGTCCCC TGGTGGAGCG AATCGACCAC CTCGGAACGG AGAACGACGT GAACGACGGC CGCGCCCTGC GCATCCTCAT CGCCGCCGAG ACCTTCCCCC CGGACGTCAA CGGCGCCGCG CGCTTCGCGC ACCGCCTCGC GGTCGGGCTC GCCGGTCGCG GGCACGACGT GCACGTCGTC TGCCTGGACC CCAGCGGCAG GCCCGGAACC GAGCGGGTGG ACGGCATCAC CGTGCACCGC CTGCGCTCGC ACCGCACCCC GTTCCACCGC ACGTTCCGGA TCGGCGTGCC CTGGCAGGTG TCGAAGGACG TCGCGGGCGT GCTCGACGCG GTCCGCCCGG ACGTCGTCCA CGTGCAGGCG CACTTCGTCG TCGGCCGCTA CGCCCTGCGC CTGGCCGCCG GGCGCGGCAT CCCGACCGCC GCGACCAACC ACTTCATGCC GGAGAACCTG TTCGGCCACG CCCACGTCCC CGGCTGGCTC CAGGGCATCG CCTCCCGCTG GGCCTGGCGC GACCTGCGCG GCGTCTTCGA CGTCGCCGAC GTGGTCACCG CCCCCACGCC CCGCGCGGTG TCCCTGCTGC ACGACAACGG GTTCCCGCGC CGCGCGGTGC CGGTGTCCTG CGGCATCGAC GTCGACCGCT ACCGCCGCCA CCCGGCGCCC GCCAACGACC GGCCGACCGT GCTGTTCGTG GGCAGGCTCG ACGAGGAGAA GCGGGTCGAC GAGCTGCTGC GCGCCGCCGC GCTCGTGCCG CTGGTGAAGG TCGACCTGGT CGGCGACGGC TCGTGCCGCG CGGAGTGGGA GAAGCTCGCC GACAAGCTCG GCATCGCCGA CCGGGTGCGG TTCCGGGGCT TCGTGGACGA GGAGGAGCTG CTCCAGGCCT ACGCGGGCGC CGACGTCTTC TGCATGCCCG GCGTGGCCGA GCTGCAGAGC CTGGCGACGA TGGAGGCCAT GGCGGCGGGC AAGCCGGTCG TGGCCGCCGA CGCGATGGCG CTGCCGCACC TGTGCCGCCC CGGCCGCAAC GGCTGGCTGT TCCAGCCCGG CGACGTCGCC GAGCTGGCGA CCAGGCTGCA CGCGCTGGCC GCCGACCCGG CGCTGCGGGC CAGGATGGGC GCGGCGAGCG GCGAGCTGAT CGCCGCGCAC GCCATCGACT CCACCCTGGC CACGTTCGAG GGCCTCTACG CCGAGGCGAT GGGCTCGGCC ACGGCAGCCG CGCCCGCCGC GCTCGCCGCC TGA
|
Protein sequence | MTWIAVGLAV VGAVFFALAA RLQHEAVRAV EGPLRVAALP GRPRWLVGLV LMVVGAGVHA VALGMAPLSV VQPVGVLAIG VTAVLDRRWA RLPAVLVTTL GVGAFVLLAA GSATPTEVRP EAELQAVLVC LALLAAAGLA GVIATRPALR SLAFGSAGGV AYGCVSLLMR AVSQDFQTGA LDLSSALTVV AIVVALLVGG WFIQHAHAGG SSHLVVACLT AVDPLVAVGL GAFLLGEAAA TGVPVALGQL AVAGVAVAGV VALARAEHDP EAGRDRHDDS DRAATRRAAP DASAPDTPDH GGAHPAGPRR ATPEHRSPDH GGAHPAGPRR ATPGHRSPDH GGAHPAGPRP TTPEHRGVQP LLTPARERSA DRGAAAREGR PARRGTTTGG PGPLVERIDH LGTENDVNDG RALRILIAAE TFPPDVNGAA RFAHRLAVGL AGRGHDVHVV CLDPSGRPGT ERVDGITVHR LRSHRTPFHR TFRIGVPWQV SKDVAGVLDA VRPDVVHVQA HFVVGRYALR LAAGRGIPTA ATNHFMPENL FGHAHVPGWL QGIASRWAWR DLRGVFDVAD VVTAPTPRAV SLLHDNGFPR RAVPVSCGID VDRYRRHPAP ANDRPTVLFV GRLDEEKRVD ELLRAAALVP LVKVDLVGDG SCRAEWEKLA DKLGIADRVR FRGFVDEEEL LQAYAGADVF CMPGVAELQS LATMEAMAAG KPVVAADAMA LPHLCRPGRN GWLFQPGDVA ELATRLHALA ADPALRARMG AASGELIAAH AIDSTLATFE GLYAEAMGSA TAAAPAALAA
|
| |