| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5144 |
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| Symbol | |
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| ID | 8329346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6132958 |
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| End bp | 6134037 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945583 |
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| Product | lycopene cyclase family protein |
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| Protein accession | YP_003102811 |
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| Protein GI | 256379151 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR01790] lycopene cyclase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGTCC TGGTGGTGGG TGGTGGTCCG GCCGGGCGGG CGTTGGCGGG TGCGGCTGCG
CGGCGGGGGC TTGAGGTGTC GCTGGTCGAC CCGCGTCCCG AGCGGCCGTG GCGGGCCACG
TACGCGGCGT GGTCGGACGA GCTGCCCGAG GGGACGCCGG TGGTGACGCG GTCGCGCGCG
CGGGCGTTCT CCACGGCCGA GCACGTGCTG GAGCGCGAGT ACTCGGTGCT GGACAACGCC
CGCCTGTGGG AGCTCCCCCC CGAGGTCGAG GTGCTCCGCG CGCGCGTGAT CGCGCGCGCG
GAGGGCCGGG TGCGCCTGGC GGACGGCCGG GTGCTGCGGG CTCGGCGGGT CGTGGACGCG
ACCGGGTCGC GGGGTGGCCG GGCGGCGCAG ACCGCGGTGG GCGTGGTGGT GAGCCAGGCC
GAGGCTGAGC CGTTCGTCGC CCCCGGCGAG GCGGTGATCA TGGACTGGCG CCGTCCACCG
TCCGCGACCA CGGGCGACCC GACGTTCCTG TACGCGGTGC CGCTGGGCCC GGACCGGGTG
CTGCTGGAGG AGACCTCGCT CGCCCGCGCG CCCGGTCTGC CGCTGGCGGA GCTGCGGTTG
CGGCTGCGGT CGCGGTTGGA CGCGCACGGC GTCCGGATGC CGTCCGCCGA GGAGCGGGTG
CGCATCCCGC TGGACGCGCC GAAGGCCGAG GACGGGTTCG GCGCGGGCGG CGGTCTGGTG
CACCCGGCGA CGGGGTACGG GGTGGCGACC GCGCTGCGGC TGGCGCCGGT GGTGGCGGAC
GCGCTCGCGG CGGGCGAGGG GCCGGAGGTG CTGTGGACGC AGGAGACGAG AATGGTGCAC
GCGCTGCGAC TGCGCGGTCT CACCGCGTTG CTGTCGCTGG CCCCTCGGGA AATCCCGGAA
TTCTTTCACC GGTTTTTCCA CTTGCCGGTG GAGAACCAGC GGGAGTACCT CTCGCACCGC
GATGACCTGC GCGGACTCAC CTCCACAATG TTGATCTTGT TCCGGTCCTC CCCCTGGCGG
GTGCGCGCCT CGCTGGCGGG TTCGGTGTTC TTCGGCCAAA GCTTGTTGAA CAGCGGGTGA
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| Protein sequence | MDVLVVGGGP AGRALAGAAA RRGLEVSLVD PRPERPWRAT YAAWSDELPE GTPVVTRSRA
RAFSTAEHVL EREYSVLDNA RLWELPPEVE VLRARVIARA EGRVRLADGR VLRARRVVDA
TGSRGGRAAQ TAVGVVVSQA EAEPFVAPGE AVIMDWRRPP SATTGDPTFL YAVPLGPDRV
LLEETSLARA PGLPLAELRL RLRSRLDAHG VRMPSAEERV RIPLDAPKAE DGFGAGGGLV
HPATGYGVAT ALRLAPVVAD ALAAGEGPEV LWTQETRMVH ALRLRGLTAL LSLAPREIPE
FFHRFFHLPV ENQREYLSHR DDLRGLTSTM LILFRSSPWR VRASLAGSVF FGQSLLNSG
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