Gene Amir_5131 details

Gene Information

• Locus tag: Amir_5131
• ID: 8329329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 6111091
• End bp: 6113037
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644945566
• Product: ABC transporter related
• Protein accession: YP_003102798
• Protein GI: 256379138
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGCGG CCGTGGCCGC CTCCGACACC CCGAACGGCG TCCGGCGCGG CACGTTCCGC 
CGGGTGCTCG CCTTCGCCCG GCCGCACCGG GCGAAGCTCG TGGTGTTCCT GCTGCTCACG 
GTCGTGTCGG CGGTGCTCGC GGTCAGCACG CCCGTGCTCG CCGGGCGGGT CGTGGACGCG 
ATCGTCGGGC ACGGCGACGT GTCCACCGTG GTCTGGCTCG CCGTCGTCAT CGCGGGCATC 
GCGGTGCTCG ACGCCGGGCT CGGCCTGGTC GAGCGCTGGC AGTCCTCCCG CATCGGCGAG 
GGCCTCATCC ACGACCTGCG GCGCGCCGTG TTCGAGCACG TGCAGAAGAT GCCCGTCGCG 
TTCTTCACCC GCACCCGCAC CGGCGCGCTG GTCAGCAGGC TCAACAACGA CGTCATCGGC 
GCCCAGCGCG CGTTCACCTC CACCCTGTCC GGGGTGGTCA CCAACGTCAT CCAGCTCGGC 
CTGTCGCTCG GCGTGATGGT CACGCTGTCC TGGCAGGTGA CCGTGCTCGC CCTGGTGCTG 
CTGCCGCTGT TCGTGCTGCC CGCGAGGCGG ATGGGCGCGC GCATGGCCGA CCTGCAGCGC 
GAGGCGTCCG GGCTGAACGC GGGCATGACC ACGCAGATGA CCGAGCGGTT CTCCGCGCCC 
GGCGCGACCC TGGTCAAGCT GTTCGGCCAC CCGCGCGCCG AGGCCGCCGA GTTCGGCGAG 
CGGGCCGCGC GGGTGCGCGA CATCGGCGTG CGCACCGCGA TGGCCACCCG CTGGTTCATG 
ACCGGCCTGA CCCTGGTGTC CGCGCTCGCC CAGGCGCTGG TCTACGGGCT CGGCGGGTAC 
CTGGCGATCA CCGGGGAGCT CGCGGCGGGC ACCGTCGTGT CGCTGGCGCT GCTGCTGACC 
AGGCTGTACG CGCCGCTGAC CGCGCTGGCC AACGCGCGCG TGGACGTGAT GACGGCGCTG 
GTGTCGTTCG AGCGGGTCTT CGAGGTGCTG GACCTGGAGC CGATGATCGC CGAGCCGGAG 
AAGCCGGTGA AGCTGCCGCA GGGACCGCTG TCGGTGGAGT TCGACGGCGT CCGCTTCGGC 
TACCCGGCCC CCGACCGGGT GTCGCTGGCA TCCCTCGAAT CGGTGGCCAC GTTGGACACG 
CGCGGTGGCG AGGAGGTGCT GCACGGGTTG GACTTCCGCG CCGAGGCCGG GCAGCTGGTC 
GCGGTGGTCG GGTCGTCGGG CGCGGGCAAG TCCACGCTGG CCTCGCTGGT GCCCAGGCTG 
TACGACGTCG ACGCGGGCGC GGTGCGGCTG TCCGGGGTGG ACGTGCGCGA GGTCGCCTCC 
GAGGACCTGC GCGGCGCGGT CGGCGTCGTC ACCCAGGACG GGCACCTGTT CCACGACACG 
ATCCGGGCCA ACCTGCTGTA CCCGAGGCCG GAGGCGGGCG AGGAGGAGGT GTGGGACGCG 
CTGCGGCGGG CCAGGCTGGA GCAGCTGGTC GCCTCGCTGC CGGACGGGCT CGACACCGTC 
GTCGGCGAGC GCGGGTACCG GCTGTCGGGC GGGGAGCGGC AGCGGCTGAC CATCGCGAGG 
CTGCTGCTGG CCAGGCCCAG GGTGGTGATC CTGGACGAGG CGACCGCGCA CCTGGACACC 
GAGTCGGAGG CGGCCGTGCA GGCCGCGCTC GGCGAGGCCC TGCGCGGCCG GACCGCGCTG 
GTGATCGCGC ACCGGTTGTC GACCATCCGC TCGGCCGACG TGATCCTCGT GGTGGAGGGC 
GGGCGGATCG TGGAGCGGGG GACGCACGAC GAGCTGATCG CGGCGAACGG GCGGTACGCG 
CAGCTGCACG GGACGCAGGA GGGCGCGCGG GGGAGCGGGA CGGCGGACGC GGTGGTGGGC 
GAGACGGCGG GCGAGACGGC GGGCGACAGG CTGGGCGACG GGTCGGAGGA CGAGGCCGCC 
GAGAAGGCGG GGGCCGCGCG GGCCTGA 

 

Protein sequence

MRAAVAASDT PNGVRRGTFR RVLAFARPHR AKLVVFLLLT VVSAVLAVST PVLAGRVVDA 
IVGHGDVSTV VWLAVVIAGI AVLDAGLGLV ERWQSSRIGE GLIHDLRRAV FEHVQKMPVA 
FFTRTRTGAL VSRLNNDVIG AQRAFTSTLS GVVTNVIQLG LSLGVMVTLS WQVTVLALVL 
LPLFVLPARR MGARMADLQR EASGLNAGMT TQMTERFSAP GATLVKLFGH PRAEAAEFGE 
RAARVRDIGV RTAMATRWFM TGLTLVSALA QALVYGLGGY LAITGELAAG TVVSLALLLT 
RLYAPLTALA NARVDVMTAL VSFERVFEVL DLEPMIAEPE KPVKLPQGPL SVEFDGVRFG 
YPAPDRVSLA SLESVATLDT RGGEEVLHGL DFRAEAGQLV AVVGSSGAGK STLASLVPRL 
YDVDAGAVRL SGVDVREVAS EDLRGAVGVV TQDGHLFHDT IRANLLYPRP EAGEEEVWDA 
LRRARLEQLV ASLPDGLDTV VGERGYRLSG GERQRLTIAR LLLARPRVVI LDEATAHLDT 
ESEAAVQAAL GEALRGRTAL VIAHRLSTIR SADVILVVEG GRIVERGTHD ELIAANGRYA 
QLHGTQEGAR GSGTADAVVG ETAGETAGDR LGDGSEDEAA EKAGAARA