Gene Amir_5130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5130 
Symbol 
ID8329328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6109816 
End bp6110553 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content75% 
IMG OID644945565 
Producthypothetical protein 
Protein accessionYP_003102797 
Protein GI256379137 
COG category[R] General function prediction only 
COG ID[COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCGA AGCGAACCGG TTCCGCGTAC GGCGACGCGG TCCGCGACCT GCTGTCCAGG 
GTGGAGGAGC AGAACGCCGC GGCGCTGGAC GACGTCGCCG AGCTCGTCCT GGCGTCGGTG
CGGGGCGACG GCGTGGTGCT CGCGGCGGGC GCGGGCCACT CGCTGGCGGC GGTCGCCGAG
ACCTTCTACC GGGCGGGCGG CCTGGCGTGC GTGCGCCCGC TGTACCACCC GGAGCTGCTG
CCGATGCACG GCGCGATCAG CAGCACCGCC GCCGAGCGCC GCTCGGGCCT GGCAGGCCAG
GTGCTGCGCG AGGCGGGGCT GGCCAGGCAC GACGTGCTGT TCGTGTTCTC CACCTCGGGC
GTGAACCCGT ACCCGGTGGA GCTGGCCGCG CACGCGGCCG ACGCGGGCTG CCCGGTGGTG
GCCGTGACGT CCCGGTCCGC GAGCGCGGCG GCGCCGAGGC GGGCGGGGTC GACGCTGGCC
GACAACGCCA CGATCGTGCT GGACAACCTG GTGCCGCCGG GCGACTCCAG CTACCCGCTG
GACGCGCCGG TGACGGCGGC GGTGTCCACG ATCGCGACCA CGTTCCTGTG GAACCTGGTG
ATGGTGCGGC TGGTGGACAA GGCCGCCGAG GAGGGCGTGG ACCTGCCGCT GTGGCGCAGC
GCGAACGTGG AGGGCGGGGA CGCGGCGAAC GCGGGGCTGC TGCGCAAGTA CCAGGCGCGG
GTGCCGCAGC TGGGCTGA
 
Protein sequence
MGAKRTGSAY GDAVRDLLSR VEEQNAAALD DVAELVLASV RGDGVVLAAG AGHSLAAVAE 
TFYRAGGLAC VRPLYHPELL PMHGAISSTA AERRSGLAGQ VLREAGLARH DVLFVFSTSG
VNPYPVELAA HAADAGCPVV AVTSRSASAA APRRAGSTLA DNATIVLDNL VPPGDSSYPL
DAPVTAAVST IATTFLWNLV MVRLVDKAAE EGVDLPLWRS ANVEGGDAAN AGLLRKYQAR
VPQLG