Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5092 |
Symbol | |
ID | 8329290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6071713 |
End bp | 6072039 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644945528 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_003102760 |
Protein GI | 256379100 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.511097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTGC GGGTGCGCGG TGAGGAACGC GGCGACTGGA AGGTGGTCGT CGTGACCGGC GAACTGGACG CCGACACGGT TCCGGTGTTG TCGGACCACC TGGAGGAGAC ACCGGCCCGG CGGATCGTGG TCGATCTCGC CGGGGTGACC TTCATGGACA CCACCGGGTT GTCGCTGGTG CTGGACTGGC ACCGCAGGCT GGTGGACACC GGCGCGGGCG ACTTCCGGCT GGCCTCGCTG CAGCCGTCGG TGCACAAGCT GTTCCGGCTC ACCGAGCTGG TGGACGTGAT GCGCATCCAC GGCAGCGTGG ACGAGGCGCT GGCCTGA
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Protein sequence | MDLRVRGEER GDWKVVVVTG ELDADTVPVL SDHLEETPAR RIVVDLAGVT FMDTTGLSLV LDWHRRLVDT GAGDFRLASL QPSVHKLFRL TELVDVMRIH GSVDEALA
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