Gene Amir_5092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5092 
Symbol 
ID8329290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6071713 
End bp6072039 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content69% 
IMG OID644945528 
Productanti-sigma-factor antagonist 
Protein accessionYP_003102760 
Protein GI256379100 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.511097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTGC GGGTGCGCGG TGAGGAACGC GGCGACTGGA AGGTGGTCGT CGTGACCGGC 
GAACTGGACG CCGACACGGT TCCGGTGTTG TCGGACCACC TGGAGGAGAC ACCGGCCCGG
CGGATCGTGG TCGATCTCGC CGGGGTGACC TTCATGGACA CCACCGGGTT GTCGCTGGTG
CTGGACTGGC ACCGCAGGCT GGTGGACACC GGCGCGGGCG ACTTCCGGCT GGCCTCGCTG
CAGCCGTCGG TGCACAAGCT GTTCCGGCTC ACCGAGCTGG TGGACGTGAT GCGCATCCAC
GGCAGCGTGG ACGAGGCGCT GGCCTGA
 
Protein sequence
MDLRVRGEER GDWKVVVVTG ELDADTVPVL SDHLEETPAR RIVVDLAGVT FMDTTGLSLV 
LDWHRRLVDT GAGDFRLASL QPSVHKLFRL TELVDVMRIH GSVDEALA