| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5038 |
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| Symbol | |
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| ID | 8329236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5996247 |
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| End bp | 5997110 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644945474 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003102706 |
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| Protein GI | 256379046 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGCA CTCAGACGCG GTCCAAGCGG AAGTTGGGGA GGAGGCTCGC CCAGCTCCGG
GTGGACGCCG GGCGGCGGCC CGACGAGATC GCGGTGGCGC TGCGGAAGTC CGCCGGGCTC
GTGTCGAAGA TCGAGAACGG GCACGTCATG CCCGACTACC CCACGCTCCA GGTCATCCTC
GCCCAGTGCG GGGTCACGGA CGTCGTCGCG CGCCGGGCCG TGGAGGAGCT GTGGGAGGAG
GCCAGGAGCA GCGCCAAGCC CGTTGAGGTC TCCCCCGGGA TGTCCTTGAA GTACCGGGCC
TACCTGCGGG CCGAGGCGGA CGCCGCCGAG GTGCTGACGG TGGAGCAGAC CCTGGTGCCC
GGACTGCTCC AGACCGGTGC TTACGCGGCG GCCGTGCAGC GGACCACGTT GCGGGCTGTG
GCCGGGGGCG GGGCCAAGAA GGCCGTCGAG TCGCGGATGG GGCGACAGCG GCGGGTGCAC
GCGGAGCGCG ACCCGCTCGT GGTGCGCGCG GTCGTGGACG AAGCGGTGGT CCGGCGGGTG
GCGGGTGGGA GCGAGGTGAT GGTGGAGCAG CTGCACCACC TGCTCGTGCT CCAGGAGCTG
CCGAACGTGA CCATCCAGGT GATCCCGTTC GAGCGCGGGC TCTACACCGA GATGGTCAGC
CCGTTCGTGC TGCTCAACTA CCCCGACCCG GTCGAGGACC CGCCGCTGGT CTACGTCGAG
CACCGGGGTG GCGGGCAGTG GGTCGAGGAC GGTGGGGAGG TCCAGGAGTT CCTGGGCGCC
TTCACCCGGA ACGCGGGGGC GGCGCTCTCG CCCGAGGAGA CGAGCGCGTT CATCCGGCGG
GAGATGGAAG GGCTGGGCGC GTGA
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| Protein sequence | MPSTQTRSKR KLGRRLAQLR VDAGRRPDEI AVALRKSAGL VSKIENGHVM PDYPTLQVIL
AQCGVTDVVA RRAVEELWEE ARSSAKPVEV SPGMSLKYRA YLRAEADAAE VLTVEQTLVP
GLLQTGAYAA AVQRTTLRAV AGGGAKKAVE SRMGRQRRVH AERDPLVVRA VVDEAVVRRV
AGGSEVMVEQ LHHLLVLQEL PNVTIQVIPF ERGLYTEMVS PFVLLNYPDP VEDPPLVYVE
HRGGGQWVED GGEVQEFLGA FTRNAGAALS PEETSAFIRR EMEGLGA
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