| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5036 |
|---|
| Symbol | |
|---|
| ID | 8329234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5995182 |
|---|
| End bp | 5995937 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644945472 |
|---|
| Product | alpha/beta hydrolase fold-1 |
|---|
| Protein accession | YP_003102704 |
|---|
| Protein GI | 256379044 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGG CGGTGTCGCG GGACGGGACG CGGATCGGGT ACGACCTGAT CGGCTCGGGT
CCGCTGGTGG TACTGGTGAG CGGGGCGTGC TCGTACCGGA TGGGCGGGTC GTCGGAGCTG
GCGGTCGCGC TGTCGGAGCA CTTCTCGGTG CTCTCGTACG ACCGGCGGGG GCGCGGGGAG
AGCGGCGACG TGCTGCCGTA CTCGGTGGCG CGCGAGGTCG AGGACGTCGG GGCGCTGATC
GAGGCGGTCG GCGGGCCGGC GTTCCTGCAC GGGCACTCGT CGGGGGCGGT GCTGGCGCTG
CACGCGGTGG CGGCGGGGCT GCCGGTGCCC GCGGTGTCGC TGGTGGAGCC GCCGCTGTCC
GGGGAGCCCG ACGACGGGCT GCTGGCGGCC GAGGTGGGGG CGCTGGTGGC GGCCGGGCGG
CGCGGGGACG CGGTGGAGCA CTTCCAGCGC ACGATCGGGG TGCCCGCGGA GCTGCTGGTG
GGGGTGCGCG AGTCGCCGAT GTGGCCGGGT CTGGAGGCGC TGGCGCACAC GCTGGTGTAC
GACCTGACCG TGTCCGCCGA CCCGCCGCCG CTGGGGTCGA TCGGGGTGCC CGCGCTGGTG
GTGGCGAGCG GGTCGAGCGA CGGGCGGCTG CGGGAGTGGG CCCGCGCGGC GGCTCGGGGG
TTGGGCGACG GGGAGTACCT GGAGCTGCCG GGGCAGTGGC ACGAAGTGCC CGCGGAGGCG
CTGGCGCCTG CGGTGAGGAG GCACTTCCTG GGGTGA
|
|---|
| Protein sequence | MAEAVSRDGT RIGYDLIGSG PLVVLVSGAC SYRMGGSSEL AVALSEHFSV LSYDRRGRGE
SGDVLPYSVA REVEDVGALI EAVGGPAFLH GHSSGAVLAL HAVAAGLPVP AVSLVEPPLS
GEPDDGLLAA EVGALVAAGR RGDAVEHFQR TIGVPAELLV GVRESPMWPG LEALAHTLVY
DLTVSADPPP LGSIGVPALV VASGSSDGRL REWARAAARG LGDGEYLELP GQWHEVPAEA
LAPAVRRHFL G
|
|---|
| |