Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5016 |
Symbol | |
ID | 8329214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5975219 |
End bp | 5976625 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644945453 |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003102685 |
Protein GI | 256379025 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.405793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCTGTCA CCGATCAGGG CGTGGAATCC GAGCGCCCTC AGCTGAGCCT CGGCACTGCG GCTGCCCGCA ACCTCGCGAC CACCACCAAG TCCGCCCCGC AGATGCAGAA CATCACCTCG CGGTGGCTGC TCAAGGTCCT GCCGTGGGAG CAGGCGGCCG GTGGCGCGTT CCGGGTCAAC CGCAGGCTCA GCTACGCGGT CGGCGACGGC AGGCTGACCT TCACCAACAC CGGCGCCGCC GTGCAGGTCG TGCCGCAGGA GCTGTGCGAG CTGCCGCTGC TGCGCGGGTT CGAGGACGTG GCCGTGCTGG CCGCGCTCGC CTCCCGCTTC AAGCAGCGCG AGTTCGCCGC GGGCGAGGTC GTCGTGGAGC GCGGGCGCAC CCAGGACGCC GTGCACCTGG TCGCGCACGG CCGGGTCAAC AAGATCGGCG AGACCGAGTA CGGCGACCAG ACCGTGCTCG GCGTGCTCGC CGACGGCGAC CACTTCGGCG GCCAGTGCCT GGCCGGTCCG CAGGGCGTCT GGGACTTCAC CGTCAAGGCG ATCACCCCGG TCACCATGCT GGTGCTGCCG TGGAGCGTGT TCGAGCAGCT CAACGGCGAG ATGGGCGGCC TGCGGGCGCA CATCCAGCGG ATGGTCAACG CCGGTCGCCA GAAGCAGAAC CACCACGGCG AGGCCGAGAT CGACATCGCC TCGGGCCACG AGGGCGAGGC CCCGCTCCCC GGCACGTTCG TGGACTACGA GCTGGCGCCG CGCGAGTACG AGCTGAGCGT CGCGCAGACC GTCCTCAACA TCCACACCCG CGTCGCGGAC CTCTACAACG AGCCGATGGA CCAGGTCGAG CAGCAGCTGC GGCTCACCAT CGAGGCGCTG CGCGAGCGCC AGGAGCACGA GCTGGTCAAC AACCGCGACT TCGGCCTGCT GCACAACTCC GACCTCGGCC AGCGCATCCA CACCCGCTCC GGCCCGCCCA CCCCGGACGA CTTCGACGAG CTGCTGTCCC TGGTGTGGAA GCAGCCGACC GCGTTCCTGG CGCACCCCAA GGTGATCGCC GCGTTCGGCC GCGAGTGCAC CAAGCGCGGG ATCTACCCGC AGAACACCGA CCTGAACGGG CACATGGTGC CCGCGTGGCG CGGCGTGCCG GTGCTGCCCT GCAACAAGAT CGGCGTCAGC GACCAGCGCA CCAGCTCGGT GATCCTGCTG CGCGCGGGCA AGGACAACCA GGGCGTGATC GGCCTGCACC AGACCGGCCT GCCCGACGAG TACCAGCCCG GCCTGAACGT GCGGTTCATG GGCATCAACG AGCGCGCGGT CATGTCGTAC CTGGTCAGCA CGTACTACTC CGCCGCGATC ATGGTCCCCG ACGCCGTCGG CGTGCTGGAG CACGTCGAGC TGGGCCGCGA GGACTGA
|
Protein sequence | MSVTDQGVES ERPQLSLGTA AARNLATTTK SAPQMQNITS RWLLKVLPWE QAAGGAFRVN RRLSYAVGDG RLTFTNTGAA VQVVPQELCE LPLLRGFEDV AVLAALASRF KQREFAAGEV VVERGRTQDA VHLVAHGRVN KIGETEYGDQ TVLGVLADGD HFGGQCLAGP QGVWDFTVKA ITPVTMLVLP WSVFEQLNGE MGGLRAHIQR MVNAGRQKQN HHGEAEIDIA SGHEGEAPLP GTFVDYELAP REYELSVAQT VLNIHTRVAD LYNEPMDQVE QQLRLTIEAL RERQEHELVN NRDFGLLHNS DLGQRIHTRS GPPTPDDFDE LLSLVWKQPT AFLAHPKVIA AFGRECTKRG IYPQNTDLNG HMVPAWRGVP VLPCNKIGVS DQRTSSVILL RAGKDNQGVI GLHQTGLPDE YQPGLNVRFM GINERAVMSY LVSTYYSAAI MVPDAVGVLE HVELGRED
|
| |