| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4964 |
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| Symbol | |
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| ID | 8329162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5922777 |
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| End bp | 5925161 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644945404 |
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| Product | Pectinesterase |
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| Protein accession | YP_003102636 |
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| Protein GI | 256378976 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4677] Pectin methylesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.467463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTACAG TCGCATTCCG GGAGCGCTCC CAGGCCAGAC CAATCCTCAA CGAGGAGGAG
AAAGTGGCGC TCATTCCCAG AGCGGTTCTC GCGGTGGTGG CCCTGGCCGC CGGGCTGACC
GCCCCGGCGG TGCTCACCGC CCCCGAGGCC GACGCCGCGA CCCCGGCGTC CGGCACCACC
TACACCCTCG CCGTGACCAG GAGCGGCATG TGCCTGGACG TCGTCGGCGG GTCCACGGCC
GACGGCGCGC TCCTGCAGCA GTGGGGCTGC ACCTCCGACC GCTGGCAGCA GTTCACCTGG
TCCTCGTCCG GCACGCTGGT CAACGCCAAC AGCGGCAAGT GCGTCGAGCC GGTCAACGGC
AACACCGCCT CGGGCGCCGC GCTCCAGCAG CGCGCCTGCG TGTCGGCCGC GAACCAGCAG
TGGCACGTCA CCGCATCCGG GAGCGGCACC TACCAGGTGG TCAACGCCGC CAACGGCAAG
TGCCTGACCA CCAAGGGCGG CTCGACGACG GCCGGCGCGG CGGTGATCCA GGAGACCTGC
TCGGAGAACT CGAACAAGCA GTGGTTGTTC ACCCCTGCCG CGTCGGCGGA GAAGCCGACG
GTGGCGGCTG ATGGGACGGG GACGTATCGG AAGGTGCAGG ACGCGGTGAA CGCGGCGCCG
TCGAACAGCT CGGCGCGGAC GGTGATCACG GTGAAGGCGG GGACCTATCG CGAGGTGGTG
ACGGTTCCGG CGGACAAGCC GAACATCACG TTGCGGGGGT TGGGGTCGGG TCCGTCGGGC
ACGGTGATCG TGTACAACAA CAGCGCGTAC ACGCACGGGA CGTCGAACAG CGCGTCGTTC
TTCGCGCGGG GTGCGGGGTT CGTGGCGGAG AACCTGACGA TCTCGAACGA TCTGGACGAG
TCGAGTGTGC CGTCGGGGGC GCAGGCGGTG GCGTTGCAGA CGAACGCGGA TCGGATCGTG
CTGCGGAACG TGCGGTTGTT GGGTGATCAG GACACGTTCC TGGTCAACGA CGCCACCCGC
GCGTACGTGG TGGACTCGTA TGTCGAGGGG ACGGTGGACT TCGTCTTCGG CGGGGGGACG
GTCGTGTTCC ACCGGACGAC GGTGCACGAG AAGCGTTCCG GTGGTGGGCC GATCACGGCG
GCGAGCACGG GGGCGGGGAA GAAGTACGGG TTCCTGTTCT ACCGGTCGAC GGTCACGGGT
GCGGCGGACG ACGTGACGCA GCTGGGTCGG CCGTGGCGTC CGGACGCGCA GGTGCTGTAC
CGGGAGTCGA CCCTGTCGGC GACGGTCAGG ACGTCGGAGC CGTGGACGGA CATGTCGGAC
AACAGCTGGA GGAACGCCCG GTTCCTGGAG TACCGGAACA CGGGCAGCGG CGCGGGGTCG
AACTCGAACC GGCCGCAGCT GTCCGACTCG CAGGCCGCTG AGTACACGCC GCAGAAGTAC
CTGGCCGGTA GCGACGGCTG GAACCCGCTG GTGGCGGCCA CCGCCGACCC CTCGGCGGCG
CGCGACTGGT CGAGCGCGGC CGACGGCTTC GCCAGGGGCG CCACCGGCGG TGCGGGCGGC
CCCTCGGTCA CCGTCACGAC CTTCGCCGAC CTGGTGAAGT ACGCGGGCGC GAGCACGCCC
TACACGATCA AGGTCTCCGG CCGGATCACG GTGACGCCGT ACGGGAAGGA GATCCCGGTG
ACGTCGAACA AGACCATCGT CGGGGTCGGC ACGTCCGGGC AGATCGTGAA CGGCGGGTTC
ACCCTCAACG GCGTGTCGAA CGTGATCATC CGGAACCTCA CCATCCGCGA CACCCGCGTC
GCCTCGGACG ACCCGGACGA CAAGGACTTC GACTACGACG GCATCCAGAT CGACAGCTCC
ACCAAGGTCT GGATCGACCA CAACACCATC ACGCGGATGA ACGACGGCCT GATCGACAGC
CGCAAGGACA CCACCGACCT GACCGTGTCC TGGAACGTGC TGGCGGACAA CAACAAGTCC
TTCGGCATCG GCTGGACCGA CAACGTCACC GCCCGCATCA CGATCCACCA CAACTGGATC
CGCGACACCG ACCAGCGCAA CCCCAGCACC GACAACGTCG CCTACGCGCA CCTGTACAAC
AACTACCTGC AGAACGTGAA GTCCTACGGC AACTACGCGC GCGGCGCCAC GAAGATGGTC
CTGGAGAACT CGTACTTCGA CAAGGTCAAG GACCCCTACT ACAAGGACGA CACCGCCCAG
CTCAAGCAGA GCGGCAACGT GGTCGTCAAC TCCAGCGGCA AGCAGCAGAG CGGCGGAGCG
GCCTTCGACC CGAAGACGTT CTACACCTAC ACCCTGGACC CGGCCGCCGA CGTCCCGAAC
CTCGTCCGGA CCTACGCGGG TCCGCAGTCG AACATCGGCG TCTGA
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| Protein sequence | MATVAFRERS QARPILNEEE KVALIPRAVL AVVALAAGLT APAVLTAPEA DAATPASGTT
YTLAVTRSGM CLDVVGGSTA DGALLQQWGC TSDRWQQFTW SSSGTLVNAN SGKCVEPVNG
NTASGAALQQ RACVSAANQQ WHVTASGSGT YQVVNAANGK CLTTKGGSTT AGAAVIQETC
SENSNKQWLF TPAASAEKPT VAADGTGTYR KVQDAVNAAP SNSSARTVIT VKAGTYREVV
TVPADKPNIT LRGLGSGPSG TVIVYNNSAY THGTSNSASF FARGAGFVAE NLTISNDLDE
SSVPSGAQAV ALQTNADRIV LRNVRLLGDQ DTFLVNDATR AYVVDSYVEG TVDFVFGGGT
VVFHRTTVHE KRSGGGPITA ASTGAGKKYG FLFYRSTVTG AADDVTQLGR PWRPDAQVLY
RESTLSATVR TSEPWTDMSD NSWRNARFLE YRNTGSGAGS NSNRPQLSDS QAAEYTPQKY
LAGSDGWNPL VAATADPSAA RDWSSAADGF ARGATGGAGG PSVTVTTFAD LVKYAGASTP
YTIKVSGRIT VTPYGKEIPV TSNKTIVGVG TSGQIVNGGF TLNGVSNVII RNLTIRDTRV
ASDDPDDKDF DYDGIQIDSS TKVWIDHNTI TRMNDGLIDS RKDTTDLTVS WNVLADNNKS
FGIGWTDNVT ARITIHHNWI RDTDQRNPST DNVAYAHLYN NYLQNVKSYG NYARGATKMV
LENSYFDKVK DPYYKDDTAQ LKQSGNVVVN SSGKQQSGGA AFDPKTFYTY TLDPAADVPN
LVRTYAGPQS NIGV
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