| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4960 |
|---|
| Symbol | |
|---|
| ID | 8329158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5917195 |
|---|
| End bp | 5918349 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644945400 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_003102632 |
|---|
| Protein GI | 256378972 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000847254 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGG ACGGGGTCGG TGCGGGCGCG GGGCGGGGGC GGACCGGCTT GGCGGCGGGG
TCCGGCGCGG CGCGCGGCGG CGTCGGCCCC GTCACCGGCG GGGACGCGGT CCGGTTGTCC
GGCAGGGGGA TCCGGTCGCT GATCGGCTTC CGGGTGCTGC CCGCGGCGGG GGTGCTGGCC
GGGCACCTCG CGCCGTTCGC GGCGGTGATG GTCCCGGCGA CGGCGGGCGC GTGGCAGGCG
GTGGACCGGG TCAACTACCT CGCGGTGGAC GTGTTCTTCC TGCTCAGCGG GTTCGGGATC
GCGCTGGGGC GGGCGGCGTC CGGCGGGGGT GGGCACGGGC GGTTCCTGTG GATGCGGCTG
GCCCGGTTGT GGCCGCTGCA CGCGGTGGTG CTGGCCGGGC TGGCGGTGGG CGCGGTGCTG
TCGGACGTGC TCGGGCTGGG GTTCGAGCGG GGTGGGACGT GGGGGTCGTT CGCGGCGCAG
GCGCTCCTGC TGCACGGGTG GGGGTTCGCG GACTCGCTGT CCTGGAACGG GCCGACCTGG
TCGCTCAGCG CGGAACTGGC CTGCTACCTG GTCTTCCCGG TGATCTGGGC GCTGGCGGGG
CGGGTGTCCG GGGCGCGGGC GGCGTGGTGC TGGCACTTCG TGGCGCTGGG GGTCGTGTTC
GGCGCGTACC GGGTGCTCGG CGCGGACGAC GCGCACCTGA CGTACCTGGC GCCGCTGTGG
CGGGCGGTCG GGGACTTCAC GGCGGGGGCG CTGCTGAGCC GGGCGCACCT GGCAGGCGGT
CGCGTGCCGG AGGTGCTGGG GCGCTGGGCC TTGCCGCTGG TGGCGGGGGT GGTGGCGCTG
GTCCCGGCGC TGGCGCTGGT GGGCGCGCCG CCGCTGTGGG CGCTGGTGCT GGTCGGGCCC
GCCGTGCTCG GGGTCGCGCA GGAGCGCGCG GCGGTGCGAC GGGTGTTCCG GGGGCCGGTG
GCGCTGCGGC TGGGCCGGTA CAGCTTCGCG GTGTTCGTGG TGCAGGTGCC GTGCCTGCTG
GCGCTGTCGC CGTTCGTGGG CGGGGTTCTC GGGGTGGTGC TCGTGGTGGC GGTGGTGCTG
GTGGTCGCGG TGGTGTGCCA CCACGCGGTC GAGGCGCCGT GCCAGCGGGC GCTGCGGGCG
TGGTGGGGGC GGTGA
|
|---|
| Protein sequence | MTADGVGAGA GRGRTGLAAG SGAARGGVGP VTGGDAVRLS GRGIRSLIGF RVLPAAGVLA
GHLAPFAAVM VPATAGAWQA VDRVNYLAVD VFFLLSGFGI ALGRAASGGG GHGRFLWMRL
ARLWPLHAVV LAGLAVGAVL SDVLGLGFER GGTWGSFAAQ ALLLHGWGFA DSLSWNGPTW
SLSAELACYL VFPVIWALAG RVSGARAAWC WHFVALGVVF GAYRVLGADD AHLTYLAPLW
RAVGDFTAGA LLSRAHLAGG RVPEVLGRWA LPLVAGVVAL VPALALVGAP PLWALVLVGP
AVLGVAQERA AVRRVFRGPV ALRLGRYSFA VFVVQVPCLL ALSPFVGGVL GVVLVVAVVL
VVAVVCHHAV EAPCQRALRA WWGR
|
|---|
| |