Gene Amir_4909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4909 
Symbol 
ID8329107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5847706 
End bp5848596 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content77% 
IMG OID644945349 
Productaminotransferase class IV 
Protein accessionYP_003102581 
Protein GI256378921 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGCG CGCTCGCCGC GTTCCACGAG GACCGGCCGC TGCCGGGGGA CGCGATCCCC 
TTCGGCAGCA ACAGCCTCCA GCACGGCACG GCGGTCTTCG AGGGCATCCG GGGCTACGCG 
GGCGTCGACG GGCCCGCCCT GTTCCGGCTC GACGACCACC TGAACCGGCT GCTCGACTCG 
GCCCGCCTCC TCGGCGTCGA CCACGACTAC GACCTGGCCG GGCTGCGCGC GCACGTGCTG 
TCCGCCGCCG CCGGGCACGG CGACGTCTAC GTCCGCCCCC TGCTGACCAC CCTGGACACC 
GCGCTCGGCG TCGACCTGCG GGCCCTGCGC TTCACCCTGG TGACCGGGCT GTGGCCGGTG 
CCGGGGCGGG ACGTGCGCCC GTCCAGGCCG GCCAGGCTCA CCGTGTCCCC GTGGCGCAGG 
CCCTCGACGG CCTCGTTCCC GGTGCGCGCC AAGGCCACCG GCTCCTACGC GAACTCCGCG 
CTGGCCAGGA CGGCCGCCGT GCGCGCGGGC TTCGACGACG CGGTCCAGCT CGACCCGGTG 
TCCGGGCGGG TCGCGGAGGG CACGGTGACC AACGTGTTCC TGGTCGCAGG CGGCGTGGTC 
CGCACCCCGT GGCTGGCGGA CAGCGTGCTG GCGGGCATCA CCAGGGACTC GGTGCTGCGC 
CTGGCGCGCG ACCTCGGCCT GACCGCCGAG GAGGGGCCGG TGACCGAGGC GGAGCTGCGG 
GACGCGGACG AGGTGTTCCT CACCGGCACG GCCAGCGAGC TGGTGCGGGT GGGCCGCGTC 
GACGGGGCCG AGTACCGGGC GGGGCCGGTG TTCGACGCGC TGGCGGAGGC GTTCCGCCGG 
GCGACCACCG GGCCGGACGA GCACGGCTGG CTCACCCCGG TGCCCGCGTG A
 
Protein sequence
MTGALAAFHE DRPLPGDAIP FGSNSLQHGT AVFEGIRGYA GVDGPALFRL DDHLNRLLDS 
ARLLGVDHDY DLAGLRAHVL SAAAGHGDVY VRPLLTTLDT ALGVDLRALR FTLVTGLWPV 
PGRDVRPSRP ARLTVSPWRR PSTASFPVRA KATGSYANSA LARTAAVRAG FDDAVQLDPV 
SGRVAEGTVT NVFLVAGGVV RTPWLADSVL AGITRDSVLR LARDLGLTAE EGPVTEAELR 
DADEVFLTGT ASELVRVGRV DGAEYRAGPV FDALAEAFRR ATTGPDEHGW LTPVPA