| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4879 |
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| Symbol | |
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| ID | 8329077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5818246 |
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| End bp | 5819628 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945319 |
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| Product | Coproporphyrinogen dehydrogenase |
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| Protein accession | YP_003102551 |
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| Protein GI | 256378891 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTCG TCGTGGACAC CCCTGTCGTG ACCGCCGCGA GCACCCCGGC GCGGGACCTG
GCCGCCCTGA TCGCGGCGGA CACCCGTGCC GACTACGTCT ACTCCTACCC GCCCAGGCAG
AGCTACCGCC CGCTCCCGCC GGGACCGGAC GCCGACGTGC CCGGTCTGGT CAGCCGCTCG
CTGGCGCGGT TCCCCGACCT CAACCTGTAC GCGCACGTCC CGTTCTGCCG CCAGATCTGC
CGCTTCTGCA ACCTCTACGC CGTGGCCGAC GCCGGGCGGG ACGACCGGCA CGACGACTAC
GTCACCGCCG TGCTGAGCGA GGCCGAGCGG CTCGCCGCGC TCACCGACCG CAAGCACGTC
ACCACCCTCT ACCTCGGCGG TGGTACCCCG TCCCTGCTGC GCCCGCAGCT GCTCGAACGC
CTGGTCACCG GCCTGCTGGC GCTGTTCGCG ACCGACCCGG CCACCCCGCC GCCGGAGACC
GCGCTGGAGG TCGACCCGGC CACCGTCGAC GCGGCGGCGC TGCGCGACAT CAGGGCGGCG
GGGATCAACC GGATCAACCT CGGCTACCAG TCGATGGTCT CGGCCGAGGT GGTCGACCTC
GGCCGCGACC GCCCGACCAC CTCGGGCCTC GACCTGCTCG CCGCGGCGCT CGGCACCGGG
TTCGCCAACG TCTGCGTCGA CCTCATCTAC GGGCTCGCGG GCCAGAGCGA CGAGGGCTGG
CTCAGCTCGT TGCGGCAGGT CACGGCCCTG CTGCCGCCGA CGGTCTGCGC CTACCCGCTC
ACCCTGCGCC CGTTCACCGG CTACCGCAGG CGCGGCTACC GCAGCGTCGA CGGCGCCCTG
CTGCACCGCC GCTACCGGGT CGCCGACCGG GTGCTGCGCG AGGCGGGGTA CCGGCAGGAG
ACGCACGTCA GGTGGGTTCG CGACCGGGGC GGCTACGTCC AGAAGGCCAA CCACTGGGGG
ATGCGCAACG TGCTCGGCGT CGGCGCGGGC GCCCGCAGCT ACCTGTGGGA GGCCGACCTG
CGCAACGGCT ACTCGGTGCG CTCCCGGTCC TCGGCGCTGC GCGACTACCT CGACCGCGTC
CGCGCCGGGC AGAGCCCCGT CCGGGACGGC TACCGCATGA CGCCCGACGA GCGGCTGCGC
AAGGCCGCCG CGCTGAACCT GATGGACCTG GACCGGAACT GGGCGCGCGA GCTGCTCGGC
GCCGACCCGG TCGAGCGCTT CGCCGACCGG TACGCGGCCT TCGCCGAGCT GGGGCTGGCC
GAGGTGGGGC CGGACCGGGC CCGCCTCACC GCCGAGGGCG TGCAGCACCG CGACCTGCTC
TCGCAAACCC TGTTCAGCCC CGAGGTGCGG ACCCGGTTGC GCGCCTTCGA CTACGACGAG
TGA
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| Protein sequence | MRVVVDTPVV TAASTPARDL AALIAADTRA DYVYSYPPRQ SYRPLPPGPD ADVPGLVSRS
LARFPDLNLY AHVPFCRQIC RFCNLYAVAD AGRDDRHDDY VTAVLSEAER LAALTDRKHV
TTLYLGGGTP SLLRPQLLER LVTGLLALFA TDPATPPPET ALEVDPATVD AAALRDIRAA
GINRINLGYQ SMVSAEVVDL GRDRPTTSGL DLLAAALGTG FANVCVDLIY GLAGQSDEGW
LSSLRQVTAL LPPTVCAYPL TLRPFTGYRR RGYRSVDGAL LHRRYRVADR VLREAGYRQE
THVRWVRDRG GYVQKANHWG MRNVLGVGAG ARSYLWEADL RNGYSVRSRS SALRDYLDRV
RAGQSPVRDG YRMTPDERLR KAAALNLMDL DRNWARELLG ADPVERFADR YAAFAELGLA
EVGPDRARLT AEGVQHRDLL SQTLFSPEVR TRLRAFDYDE
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