Gene Amir_4842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4842 
Symbol 
ID8329040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5762568 
End bp5764670 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content78% 
IMG OID644945283 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003102515 
Protein GI256378855 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1505] Serine proteases of the peptidase family S9A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGCAC CCACCACCCG CCGGGGCGAC GCGGTGACCG AGCTGCCCGG CGGCCACCGC 
GCCCCCGACC CCTACCGCGC GCTGGAGGAC GCGGGCGACC CGGAGACCGC CCGCTGGCTG
GCCGCGCAGG ACGCCCACTA CGCCGCACAC CGCGCCACCT GGGGCGACGG GCTCCTGGCG
CGCGTGGCTG AGCTCACCGC GTCACCCACC GCCGACCCGC CGGTCTGGGC GGGTGGGCAC
CGCTTCCGGG CCGCCCTGCG CCCCGGAGGG GAGCACCCCG TGCTGCTGGT GCGCCCGCCG
GGTGAGCCGG AGCGCGTGCT GCTCGACCCC GCGGCGTCCG GTCCCGACAC CACGCTGGAG
AGCTGGCACC CGTCGCCGGA CGGCCGCTCG GTGGCCGTGC TGATCAGCGA GGGCGGCACC
GAGCAGGGCG CGCTGCGCGT CCTCGACCTC GACGGCAGCG TCGTGGACGG CCCGATCGGC
CGCTCCAGGG GCACCCAGCT CGCCTGGCTG CCCGGTGCGT TCTGCTACAC CCCGCTGAGC
CCTCGACCCG ATGGGCGCCT CGCCAGGGAG GTGCGCCTGC ACCGCCTCGG CGAGCCTGAG
GAGCGGGACG TCACCGTGCT CGCCGAGGAC GGCTGCACCT CCTTCGCGCT GGAGACCGAC
GGCCACACCC TGGTGGTGGT GGCCAGCCGG GGACCGTCCG CCCCCAAGGA CGTCTGGACC
GGTCGCGTCA CCGAGGGCGG GGTGACCGAG CTGCGCCCGG TCCTGCGCGC GGCGGGCTCG
CGGGTCCAGG CCAGGCCCAC GCCCGACGGC GTGCTGGTGC TCACCGACGA CGCCGCGCCC
CGCGCCCGCA TCGCCCGCCT CACCCCCGGC GGTCAGCTGA TCGACCTCGT CGCCGAGGAC
GACGAGGCGG TCCTGCGCTC GTTCCTGCCG CTGCCCGCCG CAGAACCGGG CGCGGAACCG
GAACTGCTCG TCGTGCGCAA CCGGGGACTG GTCACCGAGG TCGCCGCGCA CCGCTTGGCG
GACGGTCGCC CCACCGGGCT CGTCGCGCTG CCCGGCGCGG GCGTCGTCAC CTCGCTCACC
GCCCACGGCG CCACCGCCTT CCTCGGCTAC ACCGACCCCA CCACCCCGCA CACCACCCTG
CGCCGCGCGC CGGGCGGGAC CGAGGCCGCC GAGTGGTCGG CCGAGCCGCC CCCGCCCGCC
GTCCCACGCC GCGCTCCTGC CAAGGCCGGG GCGCCACCGC GCTCCATCGG CGACGCGCGC
ACCGCCACCG TGCCCTGCCG CGCTCCGGAC GGCGCGGAGA TCCCGGTGCT CGCGCTCTGG
ACCGGTCCCC GCCCGACCGG CCCCCGCCCG CTGCTCCTCC AGTGCTACGG CGGTTTCGGC
GTCGTCAACG GCCCCACCTA CTCACCCGAG GCACTCGCCT GGGTCGAGGC GGGCGGCGTG
CACGTGCGGG TCGGGGTGCG CGGCGGCGGC GAGCGCGGCG CGCGGTGGCA CCGGGCGGGC
AACCGCGCCA CCAGGGCGCG CGGCGCGCAG GACCTGATCG CCGCCGCCCG CGCGCTGATC
GACCTCGGCT GGACCACCCC GGCGCGGCTC GGCCTGCTCG GCGCCTCCCA CGGCGGCCTG
GTGGTCGCCG CCGCGCTCAC CGCCGAACCC CGGCTGTTCG GCGCGGCGGT CTGCCTGGCC
CCGCTCGCGG ACATGCTCCG CTGCGAGCGG CTCGGCGCAG GCTCCCTCTG GCGCGCCGAG
TACGGCTCGG CCGAGGACCC CGAGCAGGCC GCCTGGCTCG TGGCGTGCTC GCCCTACCAC
GCGGTGCGCC CCGGAGCCGG GTACCCGCCC GTGCTGCTGG CGGTCTTCGA CGGCGACAGC
CGCGTCCACC CCGCGCACGC CCACAAGCTG TGCGCCGCCC TCCAGCACGC GTCCCACCAC
GGAGCGACCT TCCTGCGCAG GGAGAGCGGG GTCGGCCACG GCCGCCGCTC GGTCGGTCGC
GCGGCCGGCC TCGCCGCTGA CCAGCTGGCC TTCTTCTCCA CCGTCCTGAA CGGACCGAAC
CCGCCAGGCC CCGCGAGGTC CGGCACCACC CCCGCCGCCG CGCGGGAGAG GAGTGGCGCA
TGA
 
Protein sequence
MRAPTTRRGD AVTELPGGHR APDPYRALED AGDPETARWL AAQDAHYAAH RATWGDGLLA 
RVAELTASPT ADPPVWAGGH RFRAALRPGG EHPVLLVRPP GEPERVLLDP AASGPDTTLE
SWHPSPDGRS VAVLISEGGT EQGALRVLDL DGSVVDGPIG RSRGTQLAWL PGAFCYTPLS
PRPDGRLARE VRLHRLGEPE ERDVTVLAED GCTSFALETD GHTLVVVASR GPSAPKDVWT
GRVTEGGVTE LRPVLRAAGS RVQARPTPDG VLVLTDDAAP RARIARLTPG GQLIDLVAED
DEAVLRSFLP LPAAEPGAEP ELLVVRNRGL VTEVAAHRLA DGRPTGLVAL PGAGVVTSLT
AHGATAFLGY TDPTTPHTTL RRAPGGTEAA EWSAEPPPPA VPRRAPAKAG APPRSIGDAR
TATVPCRAPD GAEIPVLALW TGPRPTGPRP LLLQCYGGFG VVNGPTYSPE ALAWVEAGGV
HVRVGVRGGG ERGARWHRAG NRATRARGAQ DLIAAARALI DLGWTTPARL GLLGASHGGL
VVAAALTAEP RLFGAAVCLA PLADMLRCER LGAGSLWRAE YGSAEDPEQA AWLVACSPYH
AVRPGAGYPP VLLAVFDGDS RVHPAHAHKL CAALQHASHH GATFLRRESG VGHGRRSVGR
AAGLAADQLA FFSTVLNGPN PPGPARSGTT PAAARERSGA