| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4811 |
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| Symbol | |
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| ID | 8329009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5727628 |
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| End bp | 5730831 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644945252 |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_003102484 |
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| Protein GI | 256378824 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.382069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCG GCTTGCTGAC GTGGTTACCC GAGGAGAACC ACCCGGCTCG CAACGTCCTG
GAGGGCTTGA GCTGGGTATC GGCGATCATC GCCGTCGTCC CCACAGCGCT GCTGGCCATC
GGGTGGGCTT GGCGGACGAA TCCCCCGAAC GACGGTGAGC GCGTCACCCC GGTGCGCGTC
GGTCCGCCGA TCATCGGCGT CGTCCCGGCG CTGCTGGTCC TGCTGTCGGG GAGCCCCTGG
TGGGCGCTGG CGGTGTTCTT CCTGGTGGAG GCTGCCGTGT TCGCCAGTGG CCTGCTGGGC
GCGCTAGGGC AGGTGCTGCA AGAGCGGATC ACCGACTGGA CGAGGCGGAC CATCACCAGC
GGCATGGTCC GGTTCGGCGC GCAGTACCGC GCCTTCATGC TCCGCAGCCT TCGCACGATG
GTGGAGGAGG GACCCCCGAC CACCGGTTTC CTCCGCCCGG AACTGGACGA CGTGTTCGTC
AACGTGACCT TGGAGTACCA AGCCCCTCAG CGGGTCGCCA CCGGACTGGT AGGGGGTCTG
GACCCCGACA CCTTGGAAGA GGGCCACGTG CTCGACGACT TCCTCGACAA GGAACAGCCA
GAGGTGCTGG CGGTCACGGG CGCGCCGGGC AGCGGCAAGA CGACCCTGCT GAGGAAAGCT
GCTAGGGACA TCTGCAAGTC GACCAGGGGT AAGAGAAAAC GCCGAAGCGT GCCGCTCCTG
CTCTACCTGA GGGACCACGC CGAGACGATC GCAGCGAATC CAGAGGTCCC GGTCTTCACC
CTGCTCCACA AGCAGTTGAA GCGCGCAGGA CTCACCGCCT CGGACAGCTG GTTCGAGCGG
AGGCTCAAAT CCGGCCAGTG CGTCGTGCTG CTCGACGGGT TGGACGAGGT GGCGAGGCAG
GACGACAGGC GGGCGGTCTC CGCCTGGGTC GCACTGCAGA TCAGCGTGTA CTACAAAAAT
CACTTCGTCA TCACCTCGCG TCCCGACGGC TACAAGAGCG CCAAGATCGA GAACGCGACA
GTGCTCGCGG TCCAGCAGTT CACCGACGGG CAGATCGAGA AGTTCGTCCA CAGCTGGTAC
CGGACGATCG AGCGCCGGTC CTCCTCCGAC ACGAGCGACC TGGAGCACGT CGTCAAGACT
AAGGCCTCCG ACCTGCTCGA ACGGCTCAAC CAGAACGTCA ACCTCCGCGC CCTGACCGTC
AACCCGCTGC TGCTCACCAT GATCGTCAAC GTCCACCGCT TCCGGGGCGC GCTCCCCGGC
AGCCGTGTCG ACCTGTACGG CGAGATCTGC GAGGTCATGC TGTGGCGCAG GCAGGAGGCG
AAGAAGCTGG CAGTGGAGAT GAGCGGCCAG AAGAAAGCAG CGCTGCTGCG TGGCCTCGCC
TACCGGATGA TGAAGAACGA CGCGCCGAGC ATGAGCCGGG TGGAGGTGCT GGCTCAGATC
AAACCGGGCA TGCAGCGAAT GTCACGGGAC GTGACGGCGG AAGGCTTCCT CGCGGACGTC
ACCTCTAACG GGTTGATCGT GGAGAGCGAG AACGGCCTCT ACGCCTTCGC GCACCTGACC
TTTCAGGAGT ACCTGGCAGC GGAGCACATC CGGGACAAAG GCCTCGTGAA AGAGCTTGCC
AACCATGTGG GCTCCTCGTG GTGGCGGGAG ACCACCCTGC TCTATGCGGC GAAGTCCGAC
GCCGACGCCA TCGTCCGGGC CTGTCTGGAC CGCGGCAGCA CCGCCGCCCT GCTGCTGGCG
TTCGACTGCG CCGACCAGGA CAGCGAACTG GCACCGGAAC TGGTCGACCG GATGAACGCT
TTCCTTGAGT CGGCTCACGA ACCGGGCGCC AGCAGCGATC AATGTCTGCT GGCAGCAGGT
GTTCTTGCGG GACGGCACCT CGGGGAACTC GTCAGGACCA GCACCGAGAG CTACGTCTGC
CCGAGCCCGA TCACGAACCG GATCTACTGG CTCTACCAGC GAGGACAGCA GGACCACGAC
GCGTACCGGC TGTCGAACGT CGAGTCGGGC GGCGAGGAAG CGGTGCTGGG TGTTCGACTG
GAGGACGCGC TCGCGTTCAC GAGATGGCTG AACACGGTGT TCACGGAGAA CAAGACGTTC
CGACTGGTCG AGGAGGACGA GGTCGCCGAC CACGCCATCA CCTCCGCGCG AAGCACGCGT
AGGGGAGCCA CCTCCGATTA CAGTGTCTGG TTCAGGCGCA AGGAGCAGAA CGCTTTCGGC
TTGCTTCCAC CCCCCGGTGG GGAGCACCCC TACCACCTGA GGACCGAGGT GCTGCTCGAG
CGGACGAAGG CGGATGTCCT GGACCACGCA CCGGATCTCG TCCGCTTGGC ACTCTTGCTC
GCCTTCCGGA GAGCGGAGCA GGCCTCACTG GGGCTGGACC TGATGCAGAA CAGGATCAAG
AAAGCCGCCG AGTCGAACAC CCGCTTGAGG CAGAGCGATG TCGACGTCAA GTTGTCCAAC
CGCAGAAGGG AGCTCTCTTC AGGCCCTCGG GAGCTGACCC AGAACCTTGA GGGTGAGCGG
GAGTTGATCA CTTCCCTAGG GCTGGAGCCC GCGCTCGACA CGATCCTCGG AGTGCTCAAC
GCCATCATCC AGTCCCCCAG GGCGAGTCGT GTCAAGCACC TCCAGCACGG ACGTCGACTC
GCGAAGGAGT TGGCCGGAGA GCTGAGCCCC GAGTTCACGA GGACGCTCAC CACAGCCGAG
AACGGCGTCC GACCAGACGT CTCCGAGCAG TTCACCGGAA GAGCCCTGAA ATCGATCATG
AACAGAGCAC TGGTAGGCGG CGCGGTCAGA GAGCCTTGGA TGACGAGACT GGCGGAAGAC
CTGGTTCTCC TCGCAGCAGG CAGTGACGAC TTCGTGGTCG CACCACCGGA CACCCTCGCC
GACAGGATGG ATCTGACCCA CACAGCGCTG GTCGCCTTCA GCCAGTCGGA GGACGTCGAG
AACTTCCTGC CCTGGGCTCT CAAAGCCTCT TCGGCACTGC AGGACTTGGC GGTCCCGATT
CTCCGCTATG AGCAGCCGGT GGACCGAGGA CCCGCTTCGT TGATCAGGTT CTCCGCACTG
CTGCTCGCCG CCGAGACAGG CGTGGAGCGC AGGGGAGTGC TGAGCAAGTC CTTCCTGGAG
ATCGCCGCTG GGATCACGCT GATGGAGCAG CACCACGAGG GAACGCGCAA GCGCAACGAG
ACGATCGTGC TCGCACGCGC CTGA
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| Protein sequence | MKFGLLTWLP EENHPARNVL EGLSWVSAII AVVPTALLAI GWAWRTNPPN DGERVTPVRV
GPPIIGVVPA LLVLLSGSPW WALAVFFLVE AAVFASGLLG ALGQVLQERI TDWTRRTITS
GMVRFGAQYR AFMLRSLRTM VEEGPPTTGF LRPELDDVFV NVTLEYQAPQ RVATGLVGGL
DPDTLEEGHV LDDFLDKEQP EVLAVTGAPG SGKTTLLRKA ARDICKSTRG KRKRRSVPLL
LYLRDHAETI AANPEVPVFT LLHKQLKRAG LTASDSWFER RLKSGQCVVL LDGLDEVARQ
DDRRAVSAWV ALQISVYYKN HFVITSRPDG YKSAKIENAT VLAVQQFTDG QIEKFVHSWY
RTIERRSSSD TSDLEHVVKT KASDLLERLN QNVNLRALTV NPLLLTMIVN VHRFRGALPG
SRVDLYGEIC EVMLWRRQEA KKLAVEMSGQ KKAALLRGLA YRMMKNDAPS MSRVEVLAQI
KPGMQRMSRD VTAEGFLADV TSNGLIVESE NGLYAFAHLT FQEYLAAEHI RDKGLVKELA
NHVGSSWWRE TTLLYAAKSD ADAIVRACLD RGSTAALLLA FDCADQDSEL APELVDRMNA
FLESAHEPGA SSDQCLLAAG VLAGRHLGEL VRTSTESYVC PSPITNRIYW LYQRGQQDHD
AYRLSNVESG GEEAVLGVRL EDALAFTRWL NTVFTENKTF RLVEEDEVAD HAITSARSTR
RGATSDYSVW FRRKEQNAFG LLPPPGGEHP YHLRTEVLLE RTKADVLDHA PDLVRLALLL
AFRRAEQASL GLDLMQNRIK KAAESNTRLR QSDVDVKLSN RRRELSSGPR ELTQNLEGER
ELITSLGLEP ALDTILGVLN AIIQSPRASR VKHLQHGRRL AKELAGELSP EFTRTLTTAE
NGVRPDVSEQ FTGRALKSIM NRALVGGAVR EPWMTRLAED LVLLAAGSDD FVVAPPDTLA
DRMDLTHTAL VAFSQSEDVE NFLPWALKAS SALQDLAVPI LRYEQPVDRG PASLIRFSAL
LLAAETGVER RGVLSKSFLE IAAGITLMEQ HHEGTRKRNE TIVLARA
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