Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4804 |
Symbol | |
ID | 8329002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5720384 |
End bp | 5720989 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644945245 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003102477 |
Protein GI | 256378817 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.120851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGAAGG CCCCCGAGGA CGTCGCCCTC ACCCGAGCAG GACTGCTGTC GGCCGCGCTG AGCGCGTTCG CCGAGAACGG GTACGCCACG TCCACGCTGG CCGACATCAG CGCCAGGGCC GGGCTGACCC GAGGCGCGGC CTACCACCAC TTCACCAACA AGGCCGACCT CTACGCGACC GCCGTGGGGG AGCGGTGGGC GGAGATCGGG CAGGGCCTGT GGAGGCCGCT GCGCGAGCCG GGCGACCCGG TCGAGCGGGT GCGCTCGTTC CTGATCGGGC TGCACTTCTC GCTGGAGCAC GACGAGCGCT TCCGGCAGCT CCTGGAGGTC ATCGGGCGCA ACGACCGGCT CCCGGACGAC CACGGGTTCG ACGTGAAGCG CGAGGCCCTC GACCAGCTGC TCGGCCTGTG CGCCGCGCTG TTCGAGGAGG CCGAGGGGGA CGGGCTGCTG CGCGCCGAGG TCGAGCCGGA GGGGGCCGCC GCGATGCTCG TGGCGCACGT CCTCGGCGCG GTCACCATGC ACGCCTTCGG CGCGGCCCGC GCGGTCCGGC TCGTGCTCGG GCCCGCCGGG GACACGCTGG TGGAGGCCCT GTTCACCCGT CGCTGA
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Protein sequence | MRKAPEDVAL TRAGLLSAAL SAFAENGYAT STLADISARA GLTRGAAYHH FTNKADLYAT AVGERWAEIG QGLWRPLREP GDPVERVRSF LIGLHFSLEH DERFRQLLEV IGRNDRLPDD HGFDVKREAL DQLLGLCAAL FEEAEGDGLL RAEVEPEGAA AMLVAHVLGA VTMHAFGAAR AVRLVLGPAG DTLVEALFTR R
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