Gene Amir_4804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4804 
Symbol 
ID8329002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5720384 
End bp5720989 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content74% 
IMG OID644945245 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102477 
Protein GI256378817 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.120851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAGG CCCCCGAGGA CGTCGCCCTC ACCCGAGCAG GACTGCTGTC GGCCGCGCTG 
AGCGCGTTCG CCGAGAACGG GTACGCCACG TCCACGCTGG CCGACATCAG CGCCAGGGCC 
GGGCTGACCC GAGGCGCGGC CTACCACCAC TTCACCAACA AGGCCGACCT CTACGCGACC 
GCCGTGGGGG AGCGGTGGGC GGAGATCGGG CAGGGCCTGT GGAGGCCGCT GCGCGAGCCG 
GGCGACCCGG TCGAGCGGGT GCGCTCGTTC CTGATCGGGC TGCACTTCTC GCTGGAGCAC 
GACGAGCGCT TCCGGCAGCT CCTGGAGGTC ATCGGGCGCA ACGACCGGCT CCCGGACGAC 
CACGGGTTCG ACGTGAAGCG CGAGGCCCTC GACCAGCTGC TCGGCCTGTG CGCCGCGCTG 
TTCGAGGAGG CCGAGGGGGA CGGGCTGCTG CGCGCCGAGG TCGAGCCGGA GGGGGCCGCC 
GCGATGCTCG TGGCGCACGT CCTCGGCGCG GTCACCATGC ACGCCTTCGG CGCGGCCCGC 
GCGGTCCGGC TCGTGCTCGG GCCCGCCGGG GACACGCTGG TGGAGGCCCT GTTCACCCGT 
CGCTGA
 
Protein sequence
MRKAPEDVAL TRAGLLSAAL SAFAENGYAT STLADISARA GLTRGAAYHH FTNKADLYAT 
AVGERWAEIG QGLWRPLREP GDPVERVRSF LIGLHFSLEH DERFRQLLEV IGRNDRLPDD 
HGFDVKREAL DQLLGLCAAL FEEAEGDGLL RAEVEPEGAA AMLVAHVLGA VTMHAFGAAR 
AVRLVLGPAG DTLVEALFTR R