| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4791 |
|---|
| Symbol | |
|---|
| ID | 8328989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5706727 |
|---|
| End bp | 5707599 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 644945233 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003102465 |
|---|
| Protein GI | 256378805 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGCCC CGGACCTGGA CCTGCGCCTG GTGCGCTGCT TCACCACCGT CGCCGAGCAC
CTGCACCTCG GTCGCGCTGC CCTCGCCCTG CACACCACCC AGCCCGCGCT CAGCAGGCAG
ATCAGCAGGC TGGAGCGGCA GGTCGGGGCC CGGCTGCTCG ACCGCTCGCC GCGCGGCACC
GCGCTGACCG AGGCCGGTCG GGTGTTCCTG CCGCGCGCCC TCGCGCTGCT CGACTCGGCC
GCCGAGGCGG TCGCGGGCGC CCGCGCCGTC GGCCGGGACC GGATCACCGT CGGCTACGGC
GTCAACCTCA TCGTCACCCC GGCGGTCGCC GAGCTGCGGC GGCGGCACCC CGGCGCGGAC
GTGCGCGCCC GGCACGTCGA GTGGGACCGG GTGCGCTCCT CGCTGCTGGA GCGGCGGGTG
GACGCGGTCG TCGCCCGGCT GCCCCTGGAC GACGACGGCC TGCGGGTCGT GGTGCTGCGG
GAGGAGCCGA GGGCGCTGCT GGTCCCGACC GGGCACCGGC TGGCGGACCG GCGGTCGGTG
ACCCTGGACG ACGTGGCCGA CGAGCCGATG CCGAGGGTCC CCGACGAGCG CTGGAACGCG
TTCTGGCGCG TCGACCCCAG GCCCGGCGGC GGGCCCGCGC CGGACGGGCC GCTCGTGGAG
TCGGCGGAGG ACAAGGCGGA GCTGGTCGCG TCCGGGCAGG CCGTGGCGAT CGTGCCGGGC
GGCGAGCACC TGCGGCGGGT GCGGCCCGGC CTGGTCGCGG TGCCCCTGGA GGGCGTCGAG
CCGAGCCGCG TCGCGCTGGC CACGCGTGCG GGGGAGCGCG GCCCGCTGGT CGCGGAGTTC
CGGGAGCTGG CCGCCACCCA CCTGGTCGGC TGA
|
|---|
| Protein sequence | MPAPDLDLRL VRCFTTVAEH LHLGRAALAL HTTQPALSRQ ISRLERQVGA RLLDRSPRGT
ALTEAGRVFL PRALALLDSA AEAVAGARAV GRDRITVGYG VNLIVTPAVA ELRRRHPGAD
VRARHVEWDR VRSSLLERRV DAVVARLPLD DDGLRVVVLR EEPRALLVPT GHRLADRRSV
TLDDVADEPM PRVPDERWNA FWRVDPRPGG GPAPDGPLVE SAEDKAELVA SGQAVAIVPG
GEHLRRVRPG LVAVPLEGVE PSRVALATRA GERGPLVAEF RELAATHLVG
|
|---|
| |