| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4776 |
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| Symbol | |
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| ID | 8328974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5689751 |
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| End bp | 5691541 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945218 |
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| Product | hypothetical protein |
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| Protein accession | YP_003102450 |
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| Protein GI | 256378790 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0346034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACGA CCGAGCATCG CCGCACCGGG CGCCGGGGGA GGCCCCGGCT GCTCCACGCG
GTCACCGCGC TGCTGCTCGC CCTCGTGCTC GCGAACCCGG CCACCGCGCT CGCCCAGTCC
ACCGGCGATG TCCCGGCTGG CAGCGAGCCC GTCAGCGGTG AGCAGGCCAC CGACGCCCCG
GTCGCGGCCG AGCGCCTGAC CCTGTCGTCC GGGCACGTCG ACCTGGTCGC GGTCTTCCTG
GAGGGCGGCG ACCTCGTGGT CGCGGGCAAG GCCGACGTCG ACCGCGTCGC CACCCGCTTC
GACCCGGCCA CCACCACGCT CCAGGTCACC GACGCCGTGC GCCGCCCCGC CCCGTCCGCG
CCCGCCTACG CCTTCCTCGG CGTCCCCGGC GGCGCCCCGA TCCACGTGAT CCCGCAGACC
TTCCAGCCCG ACGTGCTCTG GGCGGGCTGG AACACCGAGT CCGTGCCGCG CGGCGCGCTC
GCGGGCGACG CGCTCGACCT GACCCTGAAC TCCGCCACCG GCCCCGGCCG CGTCGAGGTC
TACCTGTCCG GCGCGGACGG CCCCGAGCGG GTCTTCAGCT CGCACGACGA GCTGCCCGCG
CTGGACGTCG CCGTGCCCAC CCACGCCCAC GCGAACTGGG CGTTCACCGC GCCCGGCGAG
TACGAGCTGG AGTTCCAGGC CGCCGCGACC ACCCCGTCCG GCGAGCCGCT GACCTCGGAA
CCGGTCCGCT ACACCCTCGT CGTCGGCGGC GGCGACACCA CCCCGCCGAC CACCACCACG
ACCGCGCCCC CGACCACCAC CCGCCCGACC ACCACGACCC GCCCCACCAC GACGCGACCC
ACCACGACGC TGCCCACAAC CGGGCAGCCC ACAACCGGGC AGCCCACAAC CGGGCAGCCC
GCGCCCCGGC AGCCGCAGGT CCCGGTGCAG CAGCAAACCC CTGCGCCCCA GCAGGTCCAG
GCCGAGCGCT GCGTCCCCAC CGCCGTCACC CGCGCCGCCG AACCCGGCCA GGTCGAGGTC
GTCAGCGACG GCCACTTCGA CTACGGCCCC GTGGTCGAGG GCGCGGGCCT CACCGCCCGC
GTCAAGGACG ACCGCCAGGG CGAACCCGTC TACCGCGACC CGTCGAGCTA CGTCTTCCAC
CTGGACGACA CCGCCCGCAC CACCCCGCCC CAGGGCTCCG GCTACGACTT CCTCGGCGCG
GGCCCGGTGT GGATGATCCC GCTGACCCAG CGCTCCGGAA TCCCGTGGCT GGGCTGGAAC
ACCCAGCACC CCAGCGTCAC CTCGGGCATC ACCGGCGACA TCACCATGAC GCTGGAGAAC
GTCGAGGGCC CCGGCAAGCT CGCCGTCTAC GGCCAGGACC CGTTCGGCGG CGTCGGCGAC
CGCTACTTCG GCACGGCGGA GGGGTTCCCG CGCTCCACCA AGGTCCCGGT CGGCCGCTCC
GGCGTGCACG TCCACGGCGC CTGGGCGTTC ACCGCCCCCG GCGGCTACGC GGTCACCTTC
ACCTTCAGCG GCGCCCTGAA CGGCGCGCAG GTCACCGCCC GCAGCACCCT CGCCTTCCAC
GTCGGCCCCG GCGACCCGGC CACCACCCGC CCGAGCGCCC CGGTGGTCGA GCAGGCGGGC
CGCACCGCCG ACGGCCGCGA GTGCCAGGTC GACCCGCGAA CCCTTGCCAG CACGGGACTC
GACGGCTCCG CCGTGGCCGG GCTCGCCGTC GCCGCCGCCC TGCTGATCCC CCTCGGTTTC
CTGCTCACCA GCCTGTCCTC GCTGGCCACG GCCCGCACCA GGCGCCGCTG A
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| Protein sequence | MRTTEHRRTG RRGRPRLLHA VTALLLALVL ANPATALAQS TGDVPAGSEP VSGEQATDAP
VAAERLTLSS GHVDLVAVFL EGGDLVVAGK ADVDRVATRF DPATTTLQVT DAVRRPAPSA
PAYAFLGVPG GAPIHVIPQT FQPDVLWAGW NTESVPRGAL AGDALDLTLN SATGPGRVEV
YLSGADGPER VFSSHDELPA LDVAVPTHAH ANWAFTAPGE YELEFQAAAT TPSGEPLTSE
PVRYTLVVGG GDTTPPTTTT TAPPTTTRPT TTTRPTTTRP TTTLPTTGQP TTGQPTTGQP
APRQPQVPVQ QQTPAPQQVQ AERCVPTAVT RAAEPGQVEV VSDGHFDYGP VVEGAGLTAR
VKDDRQGEPV YRDPSSYVFH LDDTARTTPP QGSGYDFLGA GPVWMIPLTQ RSGIPWLGWN
TQHPSVTSGI TGDITMTLEN VEGPGKLAVY GQDPFGGVGD RYFGTAEGFP RSTKVPVGRS
GVHVHGAWAF TAPGGYAVTF TFSGALNGAQ VTARSTLAFH VGPGDPATTR PSAPVVEQAG
RTADGRECQV DPRTLASTGL DGSAVAGLAV AAALLIPLGF LLTSLSSLAT ARTRRR
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