Gene Amir_4720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4720 
Symbol 
ID8328918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5631077 
End bp5631748 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID644945164 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003102396 
Protein GI256378736 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.866037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAGTC CATCCACCAT CAACCCGGTG GCCGTGGGCG CGAGCCTGCG CGGCACCGTC 
GAGGACGCGG TCGCCGCCGC CATCGTCTCG GGAGAGCTGG CGCCGGGCAC CCTGGTCACC 
GCGCCGACCC TGGCCGCCCG CTTCGGGGTG TCCGCCACCC CGGTGCGGGA GGCCATGCTG 
AACCTGCAGA AGCGCGGGTT CGTCGACGTG GTGCGCAACA AGGGCTTCCG GATCACCCAG 
GTCAGCGAGC AGGACCTGTG GGAGATCGTG CGGCTGCGGC AGCAGCTGGA GGCCCCGCCG 
ATGCGCGGGA TCGCCAGGAC GATGCAGCCC GCGATCGCGG CGGAGCTGCG GGTGAAGGCC 
CAGGCCATAG TGGACGCCGC CGAGGTGGCG GACCTGGCGG CCTACCTGGC CGCCGACCTG 
GACTTCCACC TGCGGCTCCT GGAGCTGCAC GGCAACCGCA GGCTCATCGC GATCGTGCGG 
GACCTGCGCC AGCAGACCCG GATGGTGGGG CTGGCCAACA TGATCGGCAC CGCCGAGCTG 
GCCAGGTCCG CCGCCGAGCA CCACCTGCTG GTGGACCTCC TGGAGGCGCA CGACGGGCGG 
GGCGCGGAAG CGCTGCTCAC GGACCACATC GGGCACGTGC TCGGGTGGTG GAGCGGTAAT 
TCCGAGGACT AG
 
Protein sequence
MSSPSTINPV AVGASLRGTV EDAVAAAIVS GELAPGTLVT APTLAARFGV SATPVREAML 
NLQKRGFVDV VRNKGFRITQ VSEQDLWEIV RLRQQLEAPP MRGIARTMQP AIAAELRVKA 
QAIVDAAEVA DLAAYLAADL DFHLRLLELH GNRRLIAIVR DLRQQTRMVG LANMIGTAEL 
ARSAAEHHLL VDLLEAHDGR GAEALLTDHI GHVLGWWSGN SED