| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4697 |
|---|
| Symbol | |
|---|
| ID | 8328895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5587362 |
|---|
| End bp | 5587769 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644945141 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003102373 |
|---|
| Protein GI | 256378713 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4319] Ketosteroid isomerase homolog |
|---|
| TIGRFAM ID | [TIGR02246] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0475131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CGCTGATGGT GCACGACATC CCCACCGACG ACCTGACCAG GCAGACCGAC
CTGTTCCTGC GGGCCTTCAA CTCCTGGGAC CACGACACGA TCGAGCGCAT GTACAGCCCC
GACGCGGTGT CGGTGTGGAA GCCGGGGGAG GAACCGGTCG GCGGCGACGC CAGGAGAGCC
AACGTCGCCG AGTTCCTCGC CTGGCGGGTG CCGATGCGGG CCCGCACCAA GGGCATCTAC
GTCAACGGCG ACACGGCCCT GCTCATCGTC GACTGGGAGA TCAGGGGCAC CGCGGCCAGC
GGTGAGCTGA TCGACCTGAC CGGGACCGGC ACGGACGTGC TGCGCCGCGG CAGGGACGGC
CGCTGGCGCT ACATCATCGA CAACGCCTAC GGCGGCGCGG ACGACTGA
|
|---|
| Protein sequence | MTEPLMVHDI PTDDLTRQTD LFLRAFNSWD HDTIERMYSP DAVSVWKPGE EPVGGDARRA
NVAEFLAWRV PMRARTKGIY VNGDTALLIV DWEIRGTAAS GELIDLTGTG TDVLRRGRDG
RWRYIIDNAY GGADD
|
|---|
| |