Gene Amir_4693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4693 
Symbol 
ID8328891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5580423 
End bp5581085 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID644945137 
Productchitin-binding domain 3 protein 
Protein accessionYP_003102369 
Protein GI256378709 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATGC GAACCACCTC GAGGTCCGCG ACCAGACGGC GTGGCGTGAT CGCGGTCGTC 
GTCAGCGTTC TGGCCTGCGT CTTCGTCGCC ACGCCCTCGG CGTCCGCGCA CGGCACGATC 
GTCGGCCCGG CCACCCGCGC CTACCAGTGC TGGCAGGACT GGGGTTCGCA GCACACGAAC 
CCGGCCATGC AGCAGCAGGA CCCCACGTGC TACCAGGCGT ACCAGGCCAA CGCCGACACC 
ATGTGGAACT GGATGAGCGC GCTGCGGGAC GGCCTGAAGG GCAACTTCCA GGCCGCCACC 
CCGGACGGGC AGCTGTGCAG CAACGCCCTG GCGCGCAACA ACTCCCTGAA CACGCCGGGC 
AAGTGGCGGA CCACCAGCGT GGGCAGCAAC TTCACGATGC GCCTGCACGA CCAGGCGAGC 
CACGGCGCGG ACTACTTCAA GGTCTACGTC AGCAAGAACG GGTTCGACCC GGCCACGCAG 
CGCCTCGGCT GGGGCAACCT GGACCTCGTC GCGCAGACCG GGAAGTACGC GCCCGCCAAG 
GACATCACGT TCAACGTCCA GACCAACGGC AGCTACCGGG GGCACCACGT GGTGTTCACG 
ATCTGGCAGG CCTCGCACCT GGACCAGGCC TACATGTGGT GCAGTGACGT GAACTTCGGC 
TAG
 
Protein sequence
MRMRTTSRSA TRRRGVIAVV VSVLACVFVA TPSASAHGTI VGPATRAYQC WQDWGSQHTN 
PAMQQQDPTC YQAYQANADT MWNWMSALRD GLKGNFQAAT PDGQLCSNAL ARNNSLNTPG 
KWRTTSVGSN FTMRLHDQAS HGADYFKVYV SKNGFDPATQ RLGWGNLDLV AQTGKYAPAK 
DITFNVQTNG SYRGHHVVFT IWQASHLDQA YMWCSDVNFG