Gene Amir_4672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4672 
Symbol 
ID8328870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5558860 
End bp5559504 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content74% 
IMG OID644945118 
Producthypothetical protein 
Protein accessionYP_003102350 
Protein GI256378690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.504649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGATTC TGACGACGCT CACGGCCGCG CGCGCCGCCG CCACCGCGCT GGCCGCACCG 
GTTCCACCCT GCGGCCCCGA CCTTCCCGAG TTCACCGCGC GGGTCAGCGA GGTGACCGCC 
GAACGGCTGG GGGCGAGCTG GCGCGCGGGG TGCCCGGTCG GGCCCGAGGC GCTCCGCCTG 
GTGTCGCTGG ACTTCATCGG CTTCGACGGG GCCGCGCACC GGGGTGAGCT GGTGGTCGCC 
GAGGCGGTGG CGGGCGACGT CGTCGAGGTG TTCCGGGAGC TGTACGAGGC GCGCTTCCCG 
GTGGAGCGCG TGGAGACGGT GGAGAAGCAC GGCGCGGACG ACGACGCGTC CATGGCGGCG 
AACAACACCT CGGCGTTCAA CTGCCGCCCG ATCACCGGCG GGACGGCGTG GTCGAACCAC 
TCGTACGGGC GGGCGATCGA CCTCAACCCG GTGCAGAACC CGTACGTGTC CGCCAGCGGC 
GCGGTGCACC CGCCGAGCGG CGCGCCGTAC GTGGACCGCA CGGTGCGGGC GCCGGGGCTG 
ATCGTCGCCG GGGACGTGGT GGTGACGGCG TTCGAGAGCC GGGGCTGGAC GTGGGGCGGC 
CGGTGGCAGA CGCCGCTCGA CTACCAGCAC TTCGAGCTGC CGTGA
 
Protein sequence
MGILTTLTAA RAAATALAAP VPPCGPDLPE FTARVSEVTA ERLGASWRAG CPVGPEALRL 
VSLDFIGFDG AAHRGELVVA EAVAGDVVEV FRELYEARFP VERVETVEKH GADDDASMAA 
NNTSAFNCRP ITGGTAWSNH SYGRAIDLNP VQNPYVSASG AVHPPSGAPY VDRTVRAPGL 
IVAGDVVVTA FESRGWTWGG RWQTPLDYQH FELP