Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4631 |
Symbol | |
ID | 8328829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5513246 |
End bp | 5514061 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644945077 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003102309 |
Protein GI | 256378649 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTCGG AGGTCATGCC CCCTAGGCTG GCGGGCGTGG ACGAGCCGGT GGGGGTGCTG CTGCGGGCGT GGCGGCGGCG GAAGTCGTTG AGCCAGCAGG GCTTGGCGGA GGCGGCGGCG GTGTCGGCGC GGCACGTGAG CCGGGTGGAG ACGGGGCTGG CGCACCCGAC GCCGGAGATG ATCCTGCGCC TGGCCGAGCA CCTGGACGTG CCGCAGCCCG AGCGCGACCG GTTGCTGCTG GCGGGCGGGT ACGCGCCGCG CACCCCGGTG GCGCCCGAGG CGGCGGACCC GGTGGTGCTG GCGGGCGTGC GGGACCTGCT GGACGCGCAC CTGCCGCACC CGGCGCTGCT GCTGGACGAC CGCTGGGACC TGATCGACGC GAACGCCGCC GCGGCGGAGC TGCTGGTGGG GTGCGCGCCG CACCTGCTGG AGCCGCCGGT GAACGTGCTG CGGCTGACCA CGCACCCGGA CGGCCTCGCC CGCCGCGTCC GGAACCTGCC GCAGTGGGCG GGGCACCTGC GCGAGCAGCT CCGGCACCGC GCCGAGCGCA CCGGCGACGC CGCGCAGGTG GCGCTGCTGG CGGAGATCAC CGGTCACCTG GCCGGGCTCG GGGTGCCGCC CGCCCCCGCG GCGGGGCCGG GGCCGGTGCT GGTGCTGGAG CTGGAGTCAG ACGGCGGGGT GCTGCGGTTC GTCAGCACGT CGACGCGGCT GACCGGCCCG GCGGACCGGG CCGTGGCGGG GCTGCACCTG GAGACGCTGC TGCCCGCCGA CGAGCGCACG CGGGCGCGGT TCGCGCGGGT GGGCCTGGGC GGGTAG
|
Protein sequence | MTSEVMPPRL AGVDEPVGVL LRAWRRRKSL SQQGLAEAAA VSARHVSRVE TGLAHPTPEM ILRLAEHLDV PQPERDRLLL AGGYAPRTPV APEAADPVVL AGVRDLLDAH LPHPALLLDD RWDLIDANAA AAELLVGCAP HLLEPPVNVL RLTTHPDGLA RRVRNLPQWA GHLREQLRHR AERTGDAAQV ALLAEITGHL AGLGVPPAPA AGPGPVLVLE LESDGGVLRF VSTSTRLTGP ADRAVAGLHL ETLLPADERT RARFARVGLG G
|
| |