Gene Amir_4620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4620 
Symbol 
ID8328818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5502890 
End bp5503474 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content77% 
IMG OID644945067 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102299 
Protein GI256378639 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.732833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGAGC CGAGCAGGCG CACCAGGGGT GTGCAGCACG GGCCGCGCAG CCGCCAGGTG 
GTGGAGGCGG TGCGCGCCGC GACCCTGGCC GAGCTGGCCA GGGCGGGTTT CACCGGCGTC 
ACCATGGACG GCGTGGCCAG GGCGGCGGGC GTGAACCGCA CGACCCTCTA CCGGCGGTGG 
CCGACGAAGG CCGCGCTGCT GGCGGACGTG GTGGAACCGC TGCTGGCGCG CTACGACGCC 
GATCCGGGCA CCGGGTCGCT GCGCGGGGAC CTGCTGGCGC TGATGACCGC GATCCGGGAC 
AACGCGGCCC GCCCCGAGGG GCGGGCGCTG ATCGCGGCGG CGACGACCGG GGCGCCGGAG 
CTGGGCGAAC TGGTGCGGGC GGCGAACGCG CGCACGCTGG CGCCGTTCCA CCGGGCGCTG 
GCGCGCGCGG GCGAGCGGGG CGAGCTGGAA GGGCTGGGGG ACGCGGAGGT GATCGCGCAC 
CTGGTGTTCC ACGGGGTGGT GATGTGGGAG CAGGCCCACG GCGCGCCGCC GGGGGACGTG 
GACCTCGATC GGATCCTGGG CGCGCTGCTG CCGGGACGGG GCTGA
 
Protein sequence
MTEPSRRTRG VQHGPRSRQV VEAVRAATLA ELARAGFTGV TMDGVARAAG VNRTTLYRRW 
PTKAALLADV VEPLLARYDA DPGTGSLRGD LLALMTAIRD NAARPEGRAL IAAATTGAPE 
LGELVRAANA RTLAPFHRAL ARAGERGELE GLGDAEVIAH LVFHGVVMWE QAHGAPPGDV 
DLDRILGALL PGRG