| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4619 |
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| Symbol | |
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| ID | 8328817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5501991 |
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| End bp | 5502794 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644945066 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003102298 |
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| Protein GI | 256378638 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG CCGACGTGTC CGCCCGACCG CTGGCCGACC TGATCTCCCT CGCCGGGCGC
CGCGCCGTCG TCACCGGCGG CGGGCGCGGG CTCGGCAAGG CCATCGCCCT GCGCCTGGCC
GAGGCGGGCG CCGACCTGGT GATCGGCGAC GTCGACGCCG ACCTCGCCAC CACCGCCGCC
GAGGACGTCG CCCGCCTGCA CGGGGTGCGC GCCCTCGGCT GCGCCATGGA CGTCACCGAC
AGCGCCTCGG TCGCCGCCGC CGCCGACCGC GCGGTCGACG AGCTGGGCGG ACTGGAGGTC
TGGGTCAACA ACGCGGGCGT CTTCCCCGCC GTGCCCGCGC TGGAGCTGGC CGACGACACC
TGGGACCGGG TGTTCGCGGT GAACGCGCGC GGCACCTTCG TGGGCGCCCG CGAGGCCGCC
AAGCGCATGA CCGAGGGCGG CGCGATCGTG AACATCGTGT CCACGGCGGG CTTCCGGGGC
AGCGCGCCGG GCCTGGCCGC CTACGTCGGC TCCAAGCACG CCGTCCGGGG CCTGACCCGC
GAACTCGCCC TGGAACTGGC CCCGCTGGGC ATCCGCGTGC TCGGCGTCGC CCCCAGCCAC
GTCCCCACCG AGGGCAACCT CGCCGCCGCA GCCGCCGCAC CCCACCCCGC CGACCAGCCC
CCGACCCCGC TCATGCTCAA CGGCCCGATC GGCCGCCCCG GCGTGCCGGA CGACATCGCC
CGCGTCGCCC TGTTCTGCGC CTCGGACCTG GCCGCCTTCA TGACCGGCAG CACCCTGCTC
GCGGACGGCG GCAGCACCGC CTGA
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| Protein sequence | MTTADVSARP LADLISLAGR RAVVTGGGRG LGKAIALRLA EAGADLVIGD VDADLATTAA
EDVARLHGVR ALGCAMDVTD SASVAAAADR AVDELGGLEV WVNNAGVFPA VPALELADDT
WDRVFAVNAR GTFVGAREAA KRMTEGGAIV NIVSTAGFRG SAPGLAAYVG SKHAVRGLTR
ELALELAPLG IRVLGVAPSH VPTEGNLAAA AAAPHPADQP PTPLMLNGPI GRPGVPDDIA
RVALFCASDL AAFMTGSTLL ADGGSTA
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