Gene Amir_4618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4618 
Symbol 
ID8328816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5500749 
End bp5501987 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content75% 
IMG OID644945065 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003102297 
Protein GI256378637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCGA CGCGGAGCAG GGGCGGTCCG GTGCTGATCG CGGCGCTGGT GGTGGACTCG 
GTGGGCAACG GGATGTTCGT GCCGCTGGCG CTGCTGTTCT TCACCAGGCT CACCGAGGTG
CCGCTCACCC TGATCGGGGT GCTGGTGAGC CTGGCGAACG CGCTCACCCT GCCGATCCCG
GTGCTGGCGG GCTGGCTGGC CGACCGGGTC GGGCCGCTGC CGCTGGTGGT GGGCGCGCAG
GTCGCGCAGG GGTGGGGATA TCTGGCCTAC ACCGCGGTGG ACGGGCCGGT GGGGATCTTC
CTCAGCTCCG GGCTGGTGGC GGTGGGTGTG CGCTTCTTCT GGTCGAGCGT GTTCACCGCC
GTCGCGGACT TCGCCGACGG CAGCACCAGG GCGATGAGCA AGGACCAGTG GTTCGCCTGG
GCGAACATGG CCCGCACGGC GGGGCTTGGC GTCGGCGGGC TGGTCACGGC GGCGGTGGTC
ACCTCCGGCG ACGACGCCGT CCACCGGGGC GTCGCGGTCG GCTCGGCGGC GTGCTACCTG
CTGGCGGGGG CGGCGATCGG GGCGTTCGTG CGCGCGCCGA GGCGGGAGCG CGAGGCGGCG
GGTGACGGCG GCTACCGGGC GATGCTGCGC GACCGGCCGT TCCTGGCGCT CACCGGGATC
AACTCGGTGT TCGCGATGAC CAGCCTGATG CTGGCGCTCG GGCTGCCGGT CTTCGTGGTG
GAGGCGCTGC GGGCGCCCGC GTGGCTGGCT CCGGTGGTGC TGGTGGGCAA CACGCTGGTG
CTGTCGCTGC TGGCCGCGCC CGTGGTGAAG CGGTTGGCCC CGTTCCGGCG CACCAGGGTG
CTGGTGGCCG CCGCCGCGCT GTGGGCCGGG TGGTGCCTGC TGTTCGCGGC GCTCGGGCCG
GGTCGCCTCC TCTGGGTGGT CCCGGTGCTG CTGGTGGCGA CGGCGCTGTT CACGGCGGCG
GAGCTGGTGC ACGCGCCGGT GTCGATGGCG CTGGCCACGG CACTGGCCCC GCCGTCCGCG
CGGGGGCGGT ACCTGGCCTC GTTCCAGTAC TCGTTCACGG TGGCGAGCAT CGTGGGGCCC
GCGTTCTTCA CGTCGCTGTT CGAGGTGCGG CACTGGTTGC CGTGGCTGGC GCTGGCGGCG
GTGAACGGGC TGGCGGGGGC GGCGGTGCTG CGGCTGGAGC GGGTGGTCCC GGCGGCGGCG
CGGCGGGCGC GGGACGAGGG CGCGCTCGCT GCGGGGTGA
 
Protein sequence
MPSTRSRGGP VLIAALVVDS VGNGMFVPLA LLFFTRLTEV PLTLIGVLVS LANALTLPIP 
VLAGWLADRV GPLPLVVGAQ VAQGWGYLAY TAVDGPVGIF LSSGLVAVGV RFFWSSVFTA
VADFADGSTR AMSKDQWFAW ANMARTAGLG VGGLVTAAVV TSGDDAVHRG VAVGSAACYL
LAGAAIGAFV RAPRREREAA GDGGYRAMLR DRPFLALTGI NSVFAMTSLM LALGLPVFVV
EALRAPAWLA PVVLVGNTLV LSLLAAPVVK RLAPFRRTRV LVAAAALWAG WCLLFAALGP
GRLLWVVPVL LVATALFTAA ELVHAPVSMA LATALAPPSA RGRYLASFQY SFTVASIVGP
AFFTSLFEVR HWLPWLALAA VNGLAGAAVL RLERVVPAAA RRARDEGALA AG