| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4613 |
|---|
| Symbol | |
|---|
| ID | 8328811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5495676 |
|---|
| End bp | 5496959 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644945060 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003102292 |
|---|
| Protein GI | 256378632 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3538] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACGG TGAGCGAGAC GATCGGCGCG GCGGCGGCCC GCGTGCGGGC GACGTCCGGC
GAACGGATCG GCGCGATGGT GGAGGCCGCG CTGCTGCGCA CGCTGCGGGA CACCGTCACG
ATCGGCGCGG ACGGCAGCGC GTTCGTCATC ACCGGCGACA TCCCCGCCAT GTGGATGCGC
GACTCCACCA CGCAGCTGAC GCCGTACCTG CGGTTCCTCG CCGAGTGCCC GCCGCTGGCC
GAGCTCGTGG CCGCCGTGGT GCGCAGGCAG TTCGCCTGCC TGGACCACGA CCCGTACGCG
AACGCGTTCA ACGACGGACC GACCGGCGCC CGGTACGAGC CGGAGGACCT GTGCGCGGAC
CCGCACGTGT GGGAGCAGAA GTACGAGATC GACAGCCTGG CCTATCCGGT CGCGCTCGCG
CACGCGCTGT GGCGGTCGAC CGGCGACGCC GGGGTGTTCG ACGAGCGCGC GCGCCGCGTG
CTGCGCACGA TCGTCGCGCA GCTGCGCCTT GAGCAGCGGC ACGACGAGTC CCCGTACCGC
TTCGAGCGGC CGGGCGCGAA GTCGACCGAG ACCCTGGCGC GCGGCGGTCG CGGCACGCCC
GTGGCGGTGA CGGGCCTGAC GTGGAGCGGT TTCCGGCCCT CGGACGACGC TTGCACCTAC
GGGTACAACA TCCCGGCCAA CCTGTTCGCG GCGCAGGCGC TGCGGGCGAT CGCCGAGATC
GCCGAGGAGG TGTTGGGCGA CAGCGGTGTG GCCGCCGACG CCCGCGCGCT GTCCGCTGAG
CTGGTCGCCG CCGTGCGGAC GCACGGCGTG GTGGAGCACG GGGGCGAGCG CGTCTACGCG
TACGAGGTCG ACGGCCTGGG CGGGGTGCTG CTGATGGACG ACGCGAACAC CCCGTCGCTG
CTGTCGCTCC CCCTGCACGC GCCCGACGTG GTCGACGCGG AGGTGTGGCG GGCGACGCGG
GCGCTGGTGC TGAGCGACGC GAACCCGTAC TACTTCCGGG GCGAGGTGGC GAGCGGGATC
GGCAGCCCGC ACACGAAACC GGGCCGGGTG TGGCCGATCG CGCTGGCCGT GGAGGGCCTG
ACGGGCACCC CGGCGGACCG GCGGCGACTG CTCCGGCTGA TCGCCGACAC CGACGCGGGC
ACCGGCCACG TGCACGAGAG CTTCGACCCC TCGGACCCGA CGTCGTTCTC GCGGCCGTGG
TTCTCCTGGG CGGACTCGAT GTTCTGCGAA CTGGCGCTGG CGGTGGCCGA CGACGTGGAG
CGGGGCGACG GGGCGCCCGC CTGA
|
|---|
| Protein sequence | MATVSETIGA AAARVRATSG ERIGAMVEAA LLRTLRDTVT IGADGSAFVI TGDIPAMWMR
DSTTQLTPYL RFLAECPPLA ELVAAVVRRQ FACLDHDPYA NAFNDGPTGA RYEPEDLCAD
PHVWEQKYEI DSLAYPVALA HALWRSTGDA GVFDERARRV LRTIVAQLRL EQRHDESPYR
FERPGAKSTE TLARGGRGTP VAVTGLTWSG FRPSDDACTY GYNIPANLFA AQALRAIAEI
AEEVLGDSGV AADARALSAE LVAAVRTHGV VEHGGERVYA YEVDGLGGVL LMDDANTPSL
LSLPLHAPDV VDAEVWRATR ALVLSDANPY YFRGEVASGI GSPHTKPGRV WPIALAVEGL
TGTPADRRRL LRLIADTDAG TGHVHESFDP SDPTSFSRPW FSWADSMFCE LALAVADDVE
RGDGAPA
|
|---|
| |