Gene Amir_4521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4521 
Symbol 
ID8328718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5362294 
End bp5363166 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content79% 
IMG OID644944978 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003102211 
Protein GI256378551 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0137598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCACC CCGCCTCCCC GATCCGCGTC GACCTGCCCG CGGCGCTCGC GCACCTGCCG 
GGCGGGGTCG TCGAGCACCG CTTCGACCGG CGTGGCGACG AGGTGGTCGT GGTGCTCCAC
GGCGGGCACC TGCGCGCCGG GCTCGCGCTG GGGGAGGACG TGCTCGCCGA CGGGCGCTGC
TCGGTGCTGG TCCCCTCCCG GCCCGGCTAC GGGCGCACCC CGCTGTCGAC GGGCGGCACG
CCGGACGGGT TCGCCGACGT CGTCCGGGAG CTGTGCGACC ACCTGGGGAT CACCCGGCTG
GCCGCCGTCG TGGGCGTCTC CGCCGGGGGA CCCACCGCGC TCGCGCTCGC CGCCCGCCAC
CCCGACCTGG TGGCGCGCGT GGTGCTGTGG AGCGCGGTCG GCCCGCTGCC CTGGCCGGAC
CGGCGCACCC GCCTCGCCGC CCGCGCCGCC TTCGCACCCG CCACCGAGCG CCTGGTCTGG
ACCGCGCTGC GCCTGCTCCT GCGGGTGTCG CCCGGAGCGG GGCTCCGGGT GCTGCTGGGG
GACCTGTCCA CGGCGCCCGC GCACCGGGTC CTGGCCGCGC TGACCGCCGA GCAGCGGGCG
GCCCTGGTGG CGCTGTTCTC GCGGATGCGG TCGGGCGCCG GGTTCCGCAA CGACCTGGCC
GCGTTCCCCG ACCGCGTTCC ACCGGTGGCG CAGCCCGCGC TCGTCGTCGC CACCCGCCGG
GACGGCGCCG TCCCGTTCGC CCACGCCCTG GCGCTCGCCG CCGCCCTGCC GCGCGCCGCG
CTCGTGGAGA GCCTGGCCGA CAACCACTTC GTCTGGCTCG GGCCGGACTG GGGCCAGGTG
GGCGCGGTCG TCCGGGAGTT CGTCCTCGGG TGA
 
Protein sequence
MPHPASPIRV DLPAALAHLP GGVVEHRFDR RGDEVVVVLH GGHLRAGLAL GEDVLADGRC 
SVLVPSRPGY GRTPLSTGGT PDGFADVVRE LCDHLGITRL AAVVGVSAGG PTALALAARH
PDLVARVVLW SAVGPLPWPD RRTRLAARAA FAPATERLVW TALRLLLRVS PGAGLRVLLG
DLSTAPAHRV LAALTAEQRA ALVALFSRMR SGAGFRNDLA AFPDRVPPVA QPALVVATRR
DGAVPFAHAL ALAAALPRAA LVESLADNHF VWLGPDWGQV GAVVREFVLG