Gene Amir_4489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4489 
Symbol 
ID8328686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5319270 
End bp5319926 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content74% 
IMG OID644944946 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_003102179 
Protein GI256378519 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTGC CACCGATGTA CCGGGCCGAC GACGAGGACA GGGCGCGCCA GGTCGTCCAC 
GACTACCCGC TCGCCACGCT GGTCAGCAAC GGCCCGCGCG TCCCGCACGC CACGCACCTG 
CCGGTGGTGG CCGCGCCGGG CGCCCCGCAG GTCGGGGGGC TGGCGGGCAG CACGCTGTGG 
GGGCACCTCA ACCGGGCGAA CGCGCACTGG CGGGCGCTGG CGGGCGGTGT CCCGGCGGTG 
CTGGTGTTCA CCGGGCCGCA CGCCTACATC ACCCCGGCGA TCTACCGCAC CACGCCCGCG 
GTCCCGACCT GGGACTTCGT GTCGGTGCAC CTGCACGGCC GGGTCGAGCC GATCGACGGC 
GAGGCCGGGA CCCTGGAGGT GGTGAAGCGG ACCGCCGAGC TGTTCGAGAG CGCCTTCGGC 
GCGGGCTGGG CGGCCGAGCC GTCGCACGGG CACTTCGCGC GGATCGTGTC CGGCGTGGGC 
GCGTTCCGCT TCCACGTCGA GTCGGTGGAC TCGATGTTCA AGCTCAGCCA GGAGAAGGAC 
CGGGACGTGC GGGTGCGGAT CATCGCCAGC CTGCGCGAGG CGTCGGGTCC CGCCGCCGAG 
CTGGGACGGA TCATGCACGA GCACGGCCTC GGCGGCCGGG GAGCGGAGGG CGCATGA
 
Protein sequence
MHVPPMYRAD DEDRARQVVH DYPLATLVSN GPRVPHATHL PVVAAPGAPQ VGGLAGSTLW 
GHLNRANAHW RALAGGVPAV LVFTGPHAYI TPAIYRTTPA VPTWDFVSVH LHGRVEPIDG 
EAGTLEVVKR TAELFESAFG AGWAAEPSHG HFARIVSGVG AFRFHVESVD SMFKLSQEKD 
RDVRVRIIAS LREASGPAAE LGRIMHEHGL GGRGAEGA