| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4452 |
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| Symbol | |
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| ID | 8328649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5277705 |
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| End bp | 5278862 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644944911 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003102144 |
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| Protein GI | 256378484 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCGG ACGTCGAGGG CGATGGCGGC AGCGAGCTGC GCAGGAGGTT CAGGGACTCG
CTGCGCGTCA GGGCCGCGGC CCGCGAGCGC TCGGCCGCAC GCCTGGGCGC GCCCCCGTCG
TTACCCGAGG GCGGCGCGGC GCCCGCGTCC GCCGCCCGGA ACGCCCCCGA GCCGGTCCCC
GTCCCCGAGC CCGCCCCCGG CAGCTTCGAC CTCTACGAGT GGAGCCTCGG CCGGGGCAGC
TTCACCATCG CCGACGCCGC CCGCGAGCTG GACTGCGACC CGGACGACGT CAAGTCGATC
GTCGCCAACC TGCTCTCCCT GCACCTGGTG CACCCCTTCC ACGACCACGA CGGCGGCTTC
GTCCCGGTCG ACCCCGTCAC CGCCTCGACC AGCCTGCTCG CCCCGATCGA GATCGAGCTG
CTGGACCGCA GGGCCACCGT GAACCGGCTG CGCACCGACC TGGAGCGGAT GTCGGCGGTC
TTCCGGTCGA GCCCGTTCGG CAACCAGCGC GGCGCCTCCA TGGACATCGT CCAGGACCTC
GACGTGGTCC ACGGCCTGCT GCGCGAGGCC GCCGCGAACT GCTCCTCCGA GGTGGTGAGC
ATGCAGCCCG GCGGCGGTCG CTCCGCCCGC GAGCTCGCCG AGGCCCGGCA GCGCGACCTC
GACCTGCTCG ACCGGGGCGT GCGGATGCGC GTGCTCTACC AGCACACCGC CCGGTTCGAC
CCGACCACCC GCGAGCACGT CGCCCTGCTC TCCGGGTCGG GCGCCGAGTT CCGCACCGTC
GAGGCCCTGT TCACCCGGCT GATCGTGTTC GACCGCACCG TGGCGTTCGT CCCGGCGGAC
GACGTCGTCC GGGGCGCCGC CGCGGTGGTG CGCGACCCCG CGCTGGTGGC CTTCTTCTAC
TCCTGCTTCG AGCACGCCTG GATCAGCGCC AAGACCTTCG ACGCCCAGCG CCACGCCGTC
GACTCGATCG GCGACGACCT CAAGGTCGAG ATCGTCCGGA TGCTCGTCGA CGGCGCGAAG
GACGACGCCA TCGCGCGCAG GCTCGGCCTG TCGGTGCGCA CCACCCGCAA GCACATCGCG
CAGCTCATGC AGCGCTTCGG CGCCGCCAGC AGGTTCCAGT TCGGCTACCA GGTGAAGGCG
CACAACCTCC TCCCCTAG
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| Protein sequence | MSPDVEGDGG SELRRRFRDS LRVRAAARER SAARLGAPPS LPEGGAAPAS AARNAPEPVP
VPEPAPGSFD LYEWSLGRGS FTIADAAREL DCDPDDVKSI VANLLSLHLV HPFHDHDGGF
VPVDPVTAST SLLAPIEIEL LDRRATVNRL RTDLERMSAV FRSSPFGNQR GASMDIVQDL
DVVHGLLREA AANCSSEVVS MQPGGGRSAR ELAEARQRDL DLLDRGVRMR VLYQHTARFD
PTTREHVALL SGSGAEFRTV EALFTRLIVF DRTVAFVPAD DVVRGAAAVV RDPALVAFFY
SCFEHAWISA KTFDAQRHAV DSIGDDLKVE IVRMLVDGAK DDAIARRLGL SVRTTRKHIA
QLMQRFGAAS RFQFGYQVKA HNLLP
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