| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4424 |
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| Symbol | |
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| ID | 8328621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5219040 |
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| End bp | 5220053 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944884 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003102117 |
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| Protein GI | 256378457 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.353998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGCG TGGACGTGCT GGCTGACGCG CTGCGGATGC GCGGAGCGCG GGGGTCTCTG
GGGGTCCGGC TGGAGGCGGG CGGCTGCTGG GGCGCGCGCG TCGACGCCCT GCCGCTCGCC
TCGTTGTACC TGGTGACCGA GGGCCAGGTG TGGTTGGGGA CCAGCGGGTC CGCGCTGCGG
ATCGACGCGG GCTGCGCGGT GCACGTGCCG GAGCGGGTGC CGCACGTGCT GGTCAGCGAG
CCGGGCGCGC TCGCCGAGCG GTGCGACCTG GACGCCGCGT GCGCCGCGAT GGCCTCGGGC
GCGGTCCTGC GGCTGGGCGA CGGGCCGGTG CGCGCCCGGC TGATCACCGC CTACTACGAG
CTGGGCGACT CGCTGTTCCC CGACGCCTTC CCGGTGCTGG TCACCGCCGA GGAGCGCCCG
CAGCTGGCCG CGACCGCCGC GCTGCTGGCC GCCGAGCTGG CCGAACCGCA GTTCGGCACG
ACCGCCGCCG TGAACAGCAT CGTGGACCTG CTGCTGGTGC AGTTCGCCCG CGCGTGGCTG
GCGGCGAACC CGGTCGCGCG CTCCCGGTCC TGGCTGGGCG CGCTGCTCGA CCCGCTGGTG
CGGGAAGCGC TTACCAGGAT GCACGGCGAG CCCGCGCGGG CGTGGACGAC CGCGAACCTG
GCGTCGGCGC TCAACGTCTC GCGCGCCACC CTGTCCCGCC GGTTCCCGCT GGCGCTGGGC
GAACCGCCGG GCGCCTACCT GACCCGGTTG CGGATGGACC TGGCCGCGAT CCGGTTGCGG
GACACCGACG AGCCGCTCGA ATCGGTCGCG GAGGCGGTCG GGTACGGCTC GGGCAAGGCG
TTCAGCCGGG CGTTCCAGCG CTCGCGCGGG CGCTCGCCCA GCGACTACCG GTTCCGGGCC
CGCCACCGGG GCCGGGCGGC GGTGGTCGCC GGGCAGGGCA TCCCCGACCT GCCGATCGTG
GAGCTGCCCC TGCCCGACCC GCCCGGCGCG GCCTTGGCGC GCGACGTGTC CTGA
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| Protein sequence | MSGVDVLADA LRMRGARGSL GVRLEAGGCW GARVDALPLA SLYLVTEGQV WLGTSGSALR
IDAGCAVHVP ERVPHVLVSE PGALAERCDL DAACAAMASG AVLRLGDGPV RARLITAYYE
LGDSLFPDAF PVLVTAEERP QLAATAALLA AELAEPQFGT TAAVNSIVDL LLVQFARAWL
AANPVARSRS WLGALLDPLV REALTRMHGE PARAWTTANL ASALNVSRAT LSRRFPLALG
EPPGAYLTRL RMDLAAIRLR DTDEPLESVA EAVGYGSGKA FSRAFQRSRG RSPSDYRFRA
RHRGRAAVVA GQGIPDLPIV ELPLPDPPGA ALARDVS
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