Gene Amir_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4402 
Symbol 
ID8328599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5198601 
End bp5199272 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content77% 
IMG OID644944863 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003102096 
Protein GI256378436 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.225327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGGA CAGCCGCCAC GGACGGCAAG CGGATGCTCT CCGAGCAGGT CTTCGAGCGG 
CTGCGGGACG CGATCATGCG CGGCGACCAC GCGCCCGGCG CCCCGCTCAA GCCGCAGGAC 
CTGGCCAAGG AGCACGGGGT GAGCCTCGCC GTCGTGCGGG AGGCGCTGGT GCGCGTGGTC 
GGCGAGGGCC TGGCGGACCG GCTGCCGAAC CGGGGCTTCG CCGTGCCCGC CTTCACCGAC 
CGCCGCTGGC AGCAGATCGC GGAGGCGCGC GCCACCGTCG AACCCGTCGT GCTGCGCCTG 
GCGGTCGAAC GCGGCGACCT CGACTGGGAG GCCCGCGTCC GCGCCGCCCA CCACCGGCTC 
AGCCGCACCC CGGCGTTCAC CCCCGGCGAC GGCGAGCACT ACGGCGCCGA GTGGGCCGAG 
GCGCACCGGC TGTTCCACCG CGCGCTCCTG GACGGCTGCG GCAACCCGGT GCTGCTGGAC 
GCCTTCGACC GGATGTGGTC GGCCAGCGAA CTGGCCCGCC GCTGGGCCGG GACCCGCGCC 
CCGGAGCGGG ACCACGCCGG CGAGCACCGG GCGCTGGAGG AGGCCGCCCT GGCGCGCGAC 
GCGGACACGG CGGCCGCCCT GCTGGTCAGG CACCTGAGCC TGACGGCGCG AGCGCTCAGG 
GGCGACGACT AG
 
Protein sequence
MTRTAATDGK RMLSEQVFER LRDAIMRGDH APGAPLKPQD LAKEHGVSLA VVREALVRVV 
GEGLADRLPN RGFAVPAFTD RRWQQIAEAR ATVEPVVLRL AVERGDLDWE ARVRAAHHRL 
SRTPAFTPGD GEHYGAEWAE AHRLFHRALL DGCGNPVLLD AFDRMWSASE LARRWAGTRA 
PERDHAGEHR ALEEAALARD ADTAAALLVR HLSLTARALR GDD