Gene Amir_4394 details

Gene Information

• Locus tag: Amir_4394
• ID: 8328591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 5192871
• End bp: 5193431
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 644944856
• Product: hypothetical protein
• Protein accession: YP_003102089
• Protein GI: 256378429
• TIGRFAM ID: [TIGR03083] uncharacterized Actinobacterial protein TIGR03083; [TIGR03086] conserved hypothetical protein TIGR03086

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.487067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACCG CACAGCACCT GGCCGCCACG AACGCCGCGT TCGCCAAGGT CGTCGCGGGC 
ATCCGCCCCG ACCAGCTCGA CTCCCCCACC CCCTGCGCCG AGTTCGACGT CCGGGCCCTC 
GGCGCGCACG TCCTGCGGTA CGGCCCCGCG CTGGAGGGCG CGGCGTCCAA GGGCGCGAGC 
ACCCCCGCCC AGCCCGGCGA CGGCCCGTGG GCCGACGAGG TGCGGGCGCA GGTCGAGCGC 
TGCACGAGCG CGTGGGCGTC CCCCGAGGCG TGGGAGGGCG TGACCACGAT GGGCGGCCCG 
GACCCGCTGC CCGCGCCGCT GATCGGCAAC ATGGTGCTGT GCGAGTACGT CGTGCACGCC 
TGGGACCTGG CCCGCGCCAC CGGCCAGGAG GTCGAGCTGG ACCCCGACCT GGTCGCCGCC 
GTGCACGCCG AGCTGGTCCG CACCGCGCCG ATGGGCCGCG AGAGGGGCGC GTTCGGCCCC 
GAGGCGCCCG TGCCGCACGA CGCCCCGGTG CTGGACCGCC TGCTGGGCCT GGCCGGTCGC 
GACCCGCGCT GGACCGCCTG A 

 

Protein sequence

MSTAQHLAAT NAAFAKVVAG IRPDQLDSPT PCAEFDVRAL GAHVLRYGPA LEGAASKGAS 
TPAQPGDGPW ADEVRAQVER CTSAWASPEA WEGVTTMGGP DPLPAPLIGN MVLCEYVVHA 
WDLARATGQE VELDPDLVAA VHAELVRTAP MGRERGAFGP EAPVPHDAPV LDRLLGLAGR 
DPRWTA