| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4379 |
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| Symbol | |
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| ID | 8328576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5175087 |
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| End bp | 5176760 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944841 |
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| Product | Polyprenyl synthetase |
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| Protein accession | YP_003102074 |
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| Protein GI | 256378414 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGGGG ACCTCAGCGT GCCGAACATC GTCCACCCGC TTTCCCGCGA CGGGCGCCCA
GCGCCGTCGC CGTCCGGAAT CCAGGAGGGT TCCGAGCAGC CCTCACCGCT CGACCGGGCG
ATAGCCGACC GGTTCGGGGT GCCCGAGGCC GAGGTCGTGG TCGGGCCGGG AACGGGCGTG
CTGCTGCGGC GGTTGCTCGA CGGGCTCCTC GGTGACGGGG GTGAGGTCGT GCTCGTGGGC
GACCGGGACG GCGACGACCC GACGCCGGAC GGGATCGCGC GGCTGCTGGC GGCGCTGGCG
CCGGACGGGC TGCTCGTGGT GGACGCGTCG CGGTGGACGG GAGAGGAACC GGGCGACCGG
GACCGGAGCG GCGAGCACCC GACCGCCCGC GCGCTGGCGC TGCGGCGCCT GGACCCCCGC
GTGGTGGTGG TCGGCCCGCT CACCCCCCGC GTGGAGTTCC TGGTGGGCGG CGCGGGCGTG
GTCGCCCGGC TGCGCGCCGA GGTGCCCGCG GGGCGGATCG GGCCCGATGA GCGGGACGGC
GCGCTGGCCG CCCTGGGGAA CGGCGGGGAA GGGGTCTCGG CGGCGGTGGA GGGCAACGAC
GTGGTGATCG CGCTCGGCTC GGAGCAGACC GAGGACGACC ACGGCGCGCC CCGGTCCGGA
GCCGCGGTGC TCGACCGGCC CGAGGAGGCC CTCTCCCCCG CCGCCGTCGC GGTCGTGGCG
CGGCTGCGCG AGGCGCTGCG CGCCCAGTGG CCCGAGACCG GCGACCCGGT GCTCGACATC
TCCCGGTACG CGCTGCTGAC CCCCGGCAAG ATGCTGCGGC CCCTGCTGCT GGCGTCGGCG
GCGGGCGCGG TCGGCGGCGA CGTGGAGCGG GTGGTGCCCG CCGCGCTCGC CGTCGAGTAC
CTGCACGTGG GCTCGCTCGT GCACGACGAC GTGATCGACG ACGACGAGGT GCGGCGCGGC
CAACCGTCGG TGCAGCACCG GTTCGGCGTG CCGGAGGCCA TCGTGGTCGG CGACGCGCTG
ATCTTCAAGA CGTTCAGCGC CGTCGCCGCC TGCGTCGAGC TGGGCGTCAC CGCCGAGGCC
GCGCTGGGCG CGGCGCGGGC GATCGCCGAC GCGGGCGTGG ACGTGTGCCG GGGCCAGGCC
CTCGAAGGCG CGCTCGCGGC GGACCCCACG CACCCGCTGG GCGACTACGT CACGGTCATG
GCCCTCAAGA CCGGCGCGCT GTTCCGGGGC GCCTGCCGGG CGGGCGCGCT GCTGGGCGGC
GGCGGGCCGG AGGCGGTGGA GGCGGTCACC TCGTACGCCG AGCACCTCGG GCTGGCGTTC
CAGGTGCACG ACGACCTGCT GCCGTACCTG TCCGACTCGG CCGTCACCGG CAAGTCCGAG
CTGAGCGACC TGCGGAACCT GCGCCCCACC TACCCGGTGC TGCTGGCGCA CGAGCGGGGA
ACGGCCGGGC AGCGCGCGCG GATCGCCCGC GTGCTCAGCG GCGAGCTGCC CGCCGAGGAG
GCGTACCCGG CGCTGCGCGA GCTGCTGGTG GACACCGGCG CGCTCGCGGT GGCCACCGAG
CACGCCGAGG CCGAGGTGGC GCTGGCCAAG TCGTGCCTGT CCGGGCTGCC GGGCAACGAG
CACACCGCGA CGCTGGCCGG GGTCGCGGAC AAGTCCGTGG CGCGGAGGCG GTAG
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| Protein sequence | MNGDLSVPNI VHPLSRDGRP APSPSGIQEG SEQPSPLDRA IADRFGVPEA EVVVGPGTGV
LLRRLLDGLL GDGGEVVLVG DRDGDDPTPD GIARLLAALA PDGLLVVDAS RWTGEEPGDR
DRSGEHPTAR ALALRRLDPR VVVVGPLTPR VEFLVGGAGV VARLRAEVPA GRIGPDERDG
ALAALGNGGE GVSAAVEGND VVIALGSEQT EDDHGAPRSG AAVLDRPEEA LSPAAVAVVA
RLREALRAQW PETGDPVLDI SRYALLTPGK MLRPLLLASA AGAVGGDVER VVPAALAVEY
LHVGSLVHDD VIDDDEVRRG QPSVQHRFGV PEAIVVGDAL IFKTFSAVAA CVELGVTAEA
ALGAARAIAD AGVDVCRGQA LEGALAADPT HPLGDYVTVM ALKTGALFRG ACRAGALLGG
GGPEAVEAVT SYAEHLGLAF QVHDDLLPYL SDSAVTGKSE LSDLRNLRPT YPVLLAHERG
TAGQRARIAR VLSGELPAEE AYPALRELLV DTGALAVATE HAEAEVALAK SCLSGLPGNE
HTATLAGVAD KSVARRR
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