Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4378 |
Symbol | |
ID | 8328575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5173421 |
End bp | 5174149 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644944840 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003102073 |
Protein GI | 256378413 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCTGGA GCACCCGGCA GCTCGCCGAG TTGGCGGGCA CCAGTCTGCG GACGGTGCGG CACTACCACG AGGTCGGGCT GCTGCCCGAG CCCGAGCGGC GGGCCAACGG GTACAAGCAG TACGGGGTTG GCCACCTCGC GCGGTTGTTG CGGGTCAAGC GGTTGGCGGA GCTGGGGTTC TCGCTCGACC GGATCGCGGG GATGGCCGAC GGCGAGGAGC ATCCCGCTCA GGCGCTGCGC GACCTGGACG CCGAGTTGGC CGCCACCATC GAGCGGCTGC AGGGGGTTCG GGAGGAGTTG GCGGTCATCC TGGCGGACTC GGTGCCCGCC GACCTTCCGC CGGGGCTCGC CCCGGCGGTC GCGGTGGCGA AGTACCGCGA GTCCGACCGG GCGTTCGCCG TGATCATGGG GCGGGTGCTC AGCCCGGAGG CGATCGACCG CTACCGGGAG GTGCTGGAGG AGTACTACGG CGAACCGGAC GCCACGGGGT TCGACTCATT GCCGGAGGAC GCCGACGAGG CCACCCGCGT GCGCGTCGCC GAGCTGCTCG CCCCGCAGCT CAAGCAGCTC AAGGAGAACC ACCCCGGCGT GAGCGAGTTG CGCGACGACA CCCCGGACGG GCGTGAGCTG GCCGCGAGCG CGGTGATCGC CGCACTGCGC GACCTCTACA ACCCGGCCCA GCTCGACGTG CTCATCCGGG CGGAGCGGAT CAACGGCGCG GAGGGGTGA
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Protein sequence | MAWSTRQLAE LAGTSLRTVR HYHEVGLLPE PERRANGYKQ YGVGHLARLL RVKRLAELGF SLDRIAGMAD GEEHPAQALR DLDAELAATI ERLQGVREEL AVILADSVPA DLPPGLAPAV AVAKYRESDR AFAVIMGRVL SPEAIDRYRE VLEEYYGEPD ATGFDSLPED ADEATRVRVA ELLAPQLKQL KENHPGVSEL RDDTPDGREL AASAVIAALR DLYNPAQLDV LIRAERINGA EG
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