Gene Amir_4349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4349 
Symbol 
ID8328546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5118087 
End bp5118695 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content72% 
IMG OID644944813 
Productprotein of unknown function DUF161 
Protein accessionYP_003102046 
Protein GI256378386 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.565468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCAGG CGCCGCCGAA GCACAGCACC GCGGAGAACG TCGCGGGCAT CGTGATCGGG 
GCCTTCGTGG CCTCGCTGGG TCTGTTCCTG CTCAAGTCCG CCGGGGTGGT GACGGGTGGC 
ACGGCCGGGC TGGTGCTGCT GGTCGGGCAC CTCGTCGACT GGCCGTTCGC GGTGGTGTTC 
ACCCTGCTGA ACGCCCCGTT CGTGGCACTG GCGTGGCGCA GGCGCGGGCC TCGCTTCGTG 
GTGGCCTCGG CGGTGGCGGT GGCGCTGCTG TCGGCGTCGT CCCTGGCGCA CGCGTCCTAC 
CTGCGGGTTG ACATGATCAA CCCGCTGTAC GCCGCACTGC TCGGCAACCT GGCGGCGGGC 
ATCGGCATCC TGTTCGTCTT CCGCCACCAC GCCAGCCTCG GCGGCTTCAC GATCGTGGCC 
TTGGTCTGCC AGGACCGGTT CGGCTGGCGG GCCGGGTACG TGCTGCTGGC GCTGGACGCG 
GTGGTCGTGG CCGTGTCGGC GCTGTTCATG CCCCTGGAGG CCGTGGCCCT GTCGGCGGCG 
GGCGCCGTGG TGGTGAACCT CGTGGTGTCC GCGAACCACC GGCCGGGGCG TTATCCGGTC 
GCGCTCTGA
 
Protein sequence
MQQAPPKHST AENVAGIVIG AFVASLGLFL LKSAGVVTGG TAGLVLLVGH LVDWPFAVVF 
TLLNAPFVAL AWRRRGPRFV VASAVAVALL SASSLAHASY LRVDMINPLY AALLGNLAAG 
IGILFVFRHH ASLGGFTIVA LVCQDRFGWR AGYVLLALDA VVVAVSALFM PLEAVALSAA 
GAVVVNLVVS ANHRPGRYPV AL