| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4347 |
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| Symbol | |
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| ID | 8328544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5114391 |
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| End bp | 5117417 |
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| Gene Length | 3027 bp |
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| Protein Length | 1008 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644944811 |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_003102044 |
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| Protein GI | 256378384 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.647277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCA AGCCTGCTCT CACGTTCGCC GGTGCGTTGC GCATCCTTGG GAAGCACGAG
AGCAAGGCGG TTGAGAGGCT CGACAAGGTA CTAGGCGGGG GCATCCTCGC CTCGGGTGCC
GCTTCCCTCC TGGTCGACGG CGGGGCGTCG GTGCTGTTCG CCGCGCTGTG GGGCTGGGTC
GACCAGAAGA ACGAGGCCAC CAAGCTGCTG CGCGAATTGG TGGGGAAGCT ATCGGGCAGG
GCGGCGGGGA CCAAGGGCGT CGAGCGGCGC GACCTGATCA TCGCCGCGCA CAGCACCATC
GTGGCCGCAG CGTTCTTCGA GGTGCTGGAC GAACGCCTCG GCCCTCGGCG GGTGCGCGAG
CTGGCCGTCA CCGACGAGGA GAAGCGTCAG CTCGTCACGG ACGACGCCCA GGACTGCCAT
GACTCCCTCT ACCTGACAGA GATCCCGGCT CCGTCGCCGT CACGCGGGTT CGAGGAGAAC
CTGGAACACC TGGCCCGCTG GATCGACGCG AGGGCGGAGG AGACGGGGGA CTTCCTCACC
GGTCTCGCAG GCGGTGAAAA TACCGTCCAG GTATTCGGCG AGGGGTTCCG GGAGCAAGTC
CTGGACCGCT ACCAGTCGTA CTACCTCGCG CTGGCCGCCA CCGTCCCGGA GTTCGTGTTC
TGGGCCGTCC TGGGCGAGCA CGCCGCCACC AGGGAGCGCA TCGAAGGGCT CGGGTCCGAC
CTCCGGGCCG TTCTCGATGC CCAGGGGAGA GCGCTCGCCC AGGCCCACTC GTTGCTCGGT
CTGCTCTCCA ACCGCGACGC TGTGGTCGAC AAGCAGCGGG AAGGGCTGCG CAAGGCGAAC
GTGGGCGTGC TCGGCAAGCC CGTCGTGCCG AGTGACACCG AGCGCTACGA CACCGACATC
GTGTTCCCGA CGATCGAACG CGCTTTCGTC ACCCCGCACT ACCGCATGGC CGCTCATGAC
AAGGAGAGCC GCCCTGCGGA CGACCACTGG TGGGATGACC AGCCACTCGC GCGGGACTTG
GAGCTGATGC TCGCCGCGCA CTTCACCTCG GCCGACGCCA CGACGCTGCC CATGCTGCTG
CTGGGGCACC CCGGCGCGGG CAAGTCCATG CTCACGAAGG TCCTCGCGGC CCGGCTGCCT
GCCGAGGAGT ACACCGTGGT CCGCGTGCCG CTGCGCAGCG TGTCGGCGGG CGCGTCGATC
TCCGACCAGC TCCAGCAGGC CCTGGACATC GCGAGCAACA GTCGGCTGCG GTGGCAGGAC
CTGTCCGACC GGGCCGACAC CGTCCTGGTG GTCCTCCTGG ACGGCTTGGA CGAACTGCTC
CAAGCCGCCG ATTTCGACCG CAGCGGATAC CTGCGCGAGG TCGTGGAGTT CCAGCGGATC
GAGGAGGAGC AGAACGGCCG TCCGGTCGCG GTCGTCGTGA CGTCCCGGAC CGTGGTGGCG
GACCGGGTGG ATGTGCCGCC GGGCACGACC GTCGTCAAGC TGGAGGAGTT CGACGACGAC
CAGATCGCCG CCTGGTTGAG GGAGTGGCGC GCTGCGAACC TGGCGACGAT CCGGACAGGC
GTCGTGCGCG AGCTGACCGC CGTCGAGGCG CTGCACCACC CGCACCTGGC CCGACAGCCC
CTGCTGCTGC TCATGCTCGC CCTCTACGCC GCCGATCCCC AGTTGCCGAA GCTCGACGCT
GACCTGTCGA AGGCGGCCCT CTACGAACGG ATCTTCGACA GCTTCGCCCG CCGCGAGGTG
CGCAAGCGCG CTGGGGGCTC CTCCGAGCTG GAGCGTCGCG TGGTGGACCA GGTGTTCCGG
CTGGCGGTTG CCGCGCTCGC GATGTTCAAC CGGGGCGCGC AGAGCGTGCG GGAGAACGAC
CTGCGCGCGG ACCTCGTGGC TCTCACCGGG CAGGACGACC TCCCCGGTGA CGAGGGCGCC
CGGCTGCTCG GTGAGTTCTT CTTCGTCCAC GCGCCCGAGG CGGTTGTCCG AACCACGGAA
CGCGCCTACG AGTTCCTGCA CGCCACCTTC GGCGAGTACC TGGTGGCCCG GCACGTCATC
GATGAACTGG CTGGCCTGGC CAACGCCGCC TACGGTGGCC GGTACGGGGG GCGCACCCTC
AACGACGAGC TGCTGTTCGC CCTGCTTTCG CATCACGCTC TGGGTGCGAG GGCTTCCATC
GGCGAGTTCG CTCAGGAAAT GTTCGCCGTG ATGCCGGGGA ATGAGCAGGA TGACATCCGT
CGGGCGCTGG TGGACTTGCT CAGGTCGTTC CGGCAGCGGC GGCGCTCGAC GCAGTTCGAA
ACCTACCGGC CGACGCCGCT GGACTTCGTC CGGCAGCTCG CTGCCTACTC AGCGAACCTG
ACCACGCTGT CGATTCGGTT CAGTGACCCG GAGGTTGGGG TCCGGCTGGT GGATGTATTC
GGGGACGATG AGGCTGAAGC GCTGGCCAAC TGGAGGTCGA TGCTGTCGCT CTGGCGGTCG
GGGTTGGACC GCGACGACTG GCTGGGGCTT CTGTACTCGC TGAAAATGGA GAATGGCACG
ATTCTGGTCA ACGATTCACG GAATTTCGCC CCATTTGATA TTCCTGGCGG AGATGAGTAT
TGCATCGCCA TGGTTGGCGG GGATCGTCGG CATGCCTCTC GAATCCGTCA TGGGATAGCT
TTTGTCGATC GCTCGTTATT CTTCGGTTAT GGCCCGAGTT GGGCGGATGA GGCGCTTCCC
TGGCTGCGTT CCTTTACGTT CGAGGAAAGG GTTCATGTCG TTCGGAATTC ATTTTTTCTG
TCACCGCCGG AGAAAACCTC TGAAGAAGAC ATTGAATCTG TTTACAATGC ACTTCTTGTG
GCGCTGCAGG TTCGCACTCA CGAATTTCCC GAAAATTTTG TCATTGATGC ACTGCGGGAA
GTTGTTAAAC ATCGTCCTTT CTGTGTCAGT CGGGGGGAAA CGCTCCGCAG GGTCCTGGAT
GAAGTCGAGC CCACTATTTT TCCTGAGCTG CGCCCGCAGT GGGAAGAGCT GCGGGACCGT
TTTCGCGATC AGGACACCCG GAGCTGA
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| Protein sequence | MPRKPALTFA GALRILGKHE SKAVERLDKV LGGGILASGA ASLLVDGGAS VLFAALWGWV
DQKNEATKLL RELVGKLSGR AAGTKGVERR DLIIAAHSTI VAAAFFEVLD ERLGPRRVRE
LAVTDEEKRQ LVTDDAQDCH DSLYLTEIPA PSPSRGFEEN LEHLARWIDA RAEETGDFLT
GLAGGENTVQ VFGEGFREQV LDRYQSYYLA LAATVPEFVF WAVLGEHAAT RERIEGLGSD
LRAVLDAQGR ALAQAHSLLG LLSNRDAVVD KQREGLRKAN VGVLGKPVVP SDTERYDTDI
VFPTIERAFV TPHYRMAAHD KESRPADDHW WDDQPLARDL ELMLAAHFTS ADATTLPMLL
LGHPGAGKSM LTKVLAARLP AEEYTVVRVP LRSVSAGASI SDQLQQALDI ASNSRLRWQD
LSDRADTVLV VLLDGLDELL QAADFDRSGY LREVVEFQRI EEEQNGRPVA VVVTSRTVVA
DRVDVPPGTT VVKLEEFDDD QIAAWLREWR AANLATIRTG VVRELTAVEA LHHPHLARQP
LLLLMLALYA ADPQLPKLDA DLSKAALYER IFDSFARREV RKRAGGSSEL ERRVVDQVFR
LAVAALAMFN RGAQSVREND LRADLVALTG QDDLPGDEGA RLLGEFFFVH APEAVVRTTE
RAYEFLHATF GEYLVARHVI DELAGLANAA YGGRYGGRTL NDELLFALLS HHALGARASI
GEFAQEMFAV MPGNEQDDIR RALVDLLRSF RQRRRSTQFE TYRPTPLDFV RQLAAYSANL
TTLSIRFSDP EVGVRLVDVF GDDEAEALAN WRSMLSLWRS GLDRDDWLGL LYSLKMENGT
ILVNDSRNFA PFDIPGGDEY CIAMVGGDRR HASRIRHGIA FVDRSLFFGY GPSWADEALP
WLRSFTFEER VHVVRNSFFL SPPEKTSEED IESVYNALLV ALQVRTHEFP ENFVIDALRE
VVKHRPFCVS RGETLRRVLD EVEPTIFPEL RPQWEELRDR FRDQDTRS
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