Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4299 |
Symbol | |
ID | 8328496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5062194 |
End bp | 5062943 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944766 |
Product | ANTAR domain protein with unknown sensor |
Protein accession | YP_003101999 |
Protein GI | 256378339 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3707] Response regulator with putative antiterminator output domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCGGG ACGGCGGTGG CCTGTCCGAC GAGGGGACCG AGCTGCTGCT CAAGCAGCTC GACGGGGTCA CGCGGACCCT GCTGGACGTG CGCACGGCGG CCGAGGCGCT GGGCAAGGTC GTGGACGCGG CGACGCAGGT CATCCCCGGC GCCGACCTGG CCAGCATCAC CCTGCGCGCC TCGGACGGCT CGTTCTCCAG CCCCGTCGAG ACCGACCCGG TCGCGACCGA GCTGGACGGG GCCCAGTACC GGGACGGGCG GGGGCCCTGC GTGGACACCG CGCGGCCGGA CGGGCCCGGT TACGCCGAGA GCGGCGACCT GCGGGCCGAG CCCAGGTGGC CCGGTTTCGC CGCCGAGGCC GTGCGGCTCG GCTACCACTG CGTGCTCGCC ACCGAGCTGC TGCCGTCCGA GGGCGGGGTG TCCGGCGCGC TCAACGTGTA CTCGCGCGAG ACCGGCGCGC TCACCGCCGA CGACCGGCAC GTCGCGCTCC TGCTCGCCAC GCACGCCTCG CTCGCCCTCG CGCACGCCCA CGCCGCCGAG GTCGCCGACC TGCGGCAGGC CCAGCTGCGG CGGGCCGTGG ACAGCCGGGA CGTCATCGGG CAGGCCAAGG GCATCCTGAT GACCCGGCGC GGGATCAGCG CCGACGAGGC GTTCGCGCTG CTGCGGCGCA CCTCGCAGGA CCTGAACGTG AAGCTGGTCG ACCTGGCCAG GACCCTCGCG GACCGGCACG ACCAGCTCGA CCGCCGGTGA
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Protein sequence | MLRDGGGLSD EGTELLLKQL DGVTRTLLDV RTAAEALGKV VDAATQVIPG ADLASITLRA SDGSFSSPVE TDPVATELDG AQYRDGRGPC VDTARPDGPG YAESGDLRAE PRWPGFAAEA VRLGYHCVLA TELLPSEGGV SGALNVYSRE TGALTADDRH VALLLATHAS LALAHAHAAE VADLRQAQLR RAVDSRDVIG QAKGILMTRR GISADEAFAL LRRTSQDLNV KLVDLARTLA DRHDQLDRR
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