Gene Amir_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4299 
Symbol 
ID8328496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5062194 
End bp5062943 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content76% 
IMG OID644944766 
ProductANTAR domain protein with unknown sensor 
Protein accessionYP_003101999 
Protein GI256378339 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCGGG ACGGCGGTGG CCTGTCCGAC GAGGGGACCG AGCTGCTGCT CAAGCAGCTC 
GACGGGGTCA CGCGGACCCT GCTGGACGTG CGCACGGCGG CCGAGGCGCT GGGCAAGGTC
GTGGACGCGG CGACGCAGGT CATCCCCGGC GCCGACCTGG CCAGCATCAC CCTGCGCGCC
TCGGACGGCT CGTTCTCCAG CCCCGTCGAG ACCGACCCGG TCGCGACCGA GCTGGACGGG
GCCCAGTACC GGGACGGGCG GGGGCCCTGC GTGGACACCG CGCGGCCGGA CGGGCCCGGT
TACGCCGAGA GCGGCGACCT GCGGGCCGAG CCCAGGTGGC CCGGTTTCGC CGCCGAGGCC
GTGCGGCTCG GCTACCACTG CGTGCTCGCC ACCGAGCTGC TGCCGTCCGA GGGCGGGGTG
TCCGGCGCGC TCAACGTGTA CTCGCGCGAG ACCGGCGCGC TCACCGCCGA CGACCGGCAC
GTCGCGCTCC TGCTCGCCAC GCACGCCTCG CTCGCCCTCG CGCACGCCCA CGCCGCCGAG
GTCGCCGACC TGCGGCAGGC CCAGCTGCGG CGGGCCGTGG ACAGCCGGGA CGTCATCGGG
CAGGCCAAGG GCATCCTGAT GACCCGGCGC GGGATCAGCG CCGACGAGGC GTTCGCGCTG
CTGCGGCGCA CCTCGCAGGA CCTGAACGTG AAGCTGGTCG ACCTGGCCAG GACCCTCGCG
GACCGGCACG ACCAGCTCGA CCGCCGGTGA
 
Protein sequence
MLRDGGGLSD EGTELLLKQL DGVTRTLLDV RTAAEALGKV VDAATQVIPG ADLASITLRA 
SDGSFSSPVE TDPVATELDG AQYRDGRGPC VDTARPDGPG YAESGDLRAE PRWPGFAAEA
VRLGYHCVLA TELLPSEGGV SGALNVYSRE TGALTADDRH VALLLATHAS LALAHAHAAE
VADLRQAQLR RAVDSRDVIG QAKGILMTRR GISADEAFAL LRRTSQDLNV KLVDLARTLA
DRHDQLDRR