| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4280 |
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| Symbol | |
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| ID | 8328477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5041976 |
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| End bp | 5043313 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944747 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003101980 |
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| Protein GI | 256378320 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.361328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTGC GCGAGTCCGC CGAGGCGCTC GGCACCGCCC CGGTCGGGCG GTTGCTGTGG
CGCGCCTGCT CGCAGACGAC GCTGTCGGTC GGCGTGTACG GGATCTACGC GCTGACCAAC
GCGTGGTTCG TGGCGCGGGG CGTCGGGGCC GAGGCGATGG CGGCGGTGAA CCTGGTCGCG
CCGGTGCTGC TGGTGCTGGG CGCGGTGTCC ACGACGGTGG GCGCGGGTGG CGCGTCGCTG
GTGTCCAGGG CGCTGGGCGC GGGGGACGCG GCGACGGCCG GTCGGGCGGC GGGGAACGCG
TTCACCGTGT TCTGGGGCGC GGCGGTCGTG GTCACCGCGC TCGGCCTGCT CGGGGTGGAG
CCGCTGCTGA CGGCGCTGGG CGCGCGGGAC GGGGCGCGGG AGGTGGCGCG CGAGTACGCG
GTGGTGATCC TGGCCGGTTC GGTGCTGTCC ACGGGGTTCT CCAGCCTGGT GCGGGCCGAG
GGCCGGTTGC GGTTCTCCAC GCTGCTCTGG CTGGCGCCGG TGCTGGTGCA GATCTCCCTG
GACCCGGTGC TGATCTTCGG GTTCGACCTG GGGGTGCGCG GCGCGGCGCT GGGCACGGTC
GGCGGGCAGG CGGTGTCGGC GCTGCTGAGC CTGTGGTTCT TCTTCGTGCA GCGCGAGCGG
CCGTACCGGG TGCGCGCGGC CGACCTGCTG CCGCACGGGC CGACGGTGCG GGCGCTGCTG
GGGATCGGGG CGCCGTCGTT CCTGGCCGGG TTCGGCACGA CGCTGCTGGC GGTGCTGGTG
AACACCGCGC TGGCCGGTGC GGGCGCGGCG GCGCTGGCGG CGTACGCGGT GGCGGCGCGG
GTGCAGACGT TCGCGACGAT GCCGCTGGTC GGGATCGGAC AGGGGCTGCA ACCGGTGGTC
GGCTACAACG CGGGGCGCGG GCTGCACGCG CGGGTGGTGC GGGCCAAGGA CCTCGCGCTG
CGGGTGGCGG TCGGGTACGG GCTGGTGGCC TCGGCGCTGG TGGTGGTGTT CGCCGGGCCG
CTGGTGTCGG TGTTCCTGGA CGACCCGGCC GTCGCCGGGC AGGCGGCGAC GGCGCTGCGG
TTCGTGGCGG TCGGCTTCGC GGCGGCCGGG ATCACGCCGC TGGTGGCGGG CTACGCGCAG
TCGTTGGGCG CGACGCGGCA GGCGTGGGCG CTGGCGGTGG GCACGCTGGC GCTGGTGAGG
GCCCCGCTGG TGGTGGTGCT GGGCGGCGGC GGGACGACCG GGGTGTGGGT GGCGCTGGCG
GCCGGCGAGG TGGGGTCGGC GCTGTGCGCG CTGGTGGTGC TGCGGCGGTT GCGGCCGGGT
GGGGTCAGCG CCGGGTGA
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| Protein sequence | MRVRESAEAL GTAPVGRLLW RACSQTTLSV GVYGIYALTN AWFVARGVGA EAMAAVNLVA
PVLLVLGAVS TTVGAGGASL VSRALGAGDA ATAGRAAGNA FTVFWGAAVV VTALGLLGVE
PLLTALGARD GAREVAREYA VVILAGSVLS TGFSSLVRAE GRLRFSTLLW LAPVLVQISL
DPVLIFGFDL GVRGAALGTV GGQAVSALLS LWFFFVQRER PYRVRAADLL PHGPTVRALL
GIGAPSFLAG FGTTLLAVLV NTALAGAGAA ALAAYAVAAR VQTFATMPLV GIGQGLQPVV
GYNAGRGLHA RVVRAKDLAL RVAVGYGLVA SALVVVFAGP LVSVFLDDPA VAGQAATALR
FVAVGFAAAG ITPLVAGYAQ SLGATRQAWA LAVGTLALVR APLVVVLGGG GTTGVWVALA
AGEVGSALCA LVVLRRLRPG GVSAG
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