Gene Amir_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4220 
Symbol 
ID8328413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4973198 
End bp4973830 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content82% 
IMG OID644944684 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003101921 
Protein GI256378261 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGCC TGCGGCTGGT CGTGCTCGGC GCGACCGGGG GCGTCGGCGG GCACGTGGTG 
GCGCACGCCC TGCGGCGCGG CCACTCGGTG ACCGCGCTCA GCCGCGACCC GCGCGGGCTG 
CCCGAGCACG GGGCGCTGCG GGTGGTGGCG GTGGACGTGC GGGACCGGGA CGCGGTCGCG 
GAGGCGCTGG CCGGGTGCGA CGCGGCCGTG TCGGCGCTGG GCAACCCGCC GGGGTCCCGC 
CCCGGCGTGC TGGCGGCGGG CGCGGCGTCC CTGGTGGCGG CGACCCCGCC GCGCCTGGTG 
TGGCTGGGCG CGCACGGCAC CGGCCCGTCC GCGAACGCCG CGACCGCGGC GCTGCTGCGC 
CTGGCGCTGG GCGCGGAGGA GGTGGCCGAC AAGGTGGCGG CCGACGCGCT GGTCCTGGCG 
GCGGGCGGCA CGGTCGTCCA CGCGGGCCCG CTGACCGGCC CTGCCGTCGA CTGGACCACC 
CTGGACGTGA CCACCCCCGC GGGCGCCCGC CTGCTCCCCC TCGGCGCCCG CCGCCTGCCG 
CGCCCGGTGC GGCGCTCGAC GCTGGCCGCG CTGCTGCTGA CCGAGGCCGA GCACCCCCGG 
CACGCCGGAG CGATCGCGAT CGCGGCAGGC TGA
 
Protein sequence
MSGLRLVVLG ATGGVGGHVV AHALRRGHSV TALSRDPRGL PEHGALRVVA VDVRDRDAVA 
EALAGCDAAV SALGNPPGSR PGVLAAGAAS LVAATPPRLV WLGAHGTGPS ANAATAALLR 
LALGAEEVAD KVAADALVLA AGGTVVHAGP LTGPAVDWTT LDVTTPAGAR LLPLGARRLP 
RPVRRSTLAA LLLTEAEHPR HAGAIAIAAG