| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4150 |
|---|
| Symbol | |
|---|
| ID | 8328343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4882198 |
|---|
| End bp | 4883199 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644944614 |
|---|
| Product | Ricin B lectin |
|---|
| Protein accession | YP_003101851 |
|---|
| Protein GI | 256378191 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.536869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGCT GGTTGTCCGT GGCGTGCGCA GCTTTCGTGG CACTCCCGCT GGGGGCGGGG
ATCGCGCAGG CCGAGGAGCC GGTCGAGCAG CAGGACCGCG TGGGGGTCAA GGTCAGCGAG
GCGCTCGCGG GGCAGTCGTC CCCCGAGGAC TTCCTCGCCC GCGCGAGCAG GAACGACATG
TCCGCCCAGG CGGTCGGCAA CAACACGATC GCCGGTCGGC TCTGGAACGA CTTCAACAAC
GACGGCTACC GGGGGGACAG CGAGTCCGGC CTGTCGACCC GCGTCGTCCT GCTCGGCGAG
GTGAACGGCG TCCCGACGGA GACCGAGACC TACTCGCAGG GCAACGGCGC GTACGCGTTC
TACAACCTGC CCGCGGGCAT GTACCAGGTC TGGGTGGACG TCAAGCCGGT GAGCACGTGG
CTGATCCCCA CCAGGATCAG CGTGGGCGGC GACCGCCAGC GCGACTCCGA CATGGTCGGC
CCGGTCGCCC TGAGCATGCC GGTCCACTTC GTCGACGACG GCCCCGCGCA GCGCGGCGTC
GACGGCGGCT TCATCACGTC CGAGTACTAC TACGGCTACA GCGTCAAGAA CAGCGCCAGC
GCCTGGTGCC TGGACCAGGA GTCCCCGCAG GGCTTCCCGA CCACCACGGT CGGCGTCCAC
CACTGCAACA ACGGCATCAA CCAGGTGTGG GACGTGAAGT GGGACTTCAC CGAGCACCTC
GGCATCGTCC GGTTCGAGAA CTTCTCGTCC GACTACTGCC TCGACCAGGA GTACCCGAAC
GGCCTGCAGA CGCCGCGCGT CGGCGCCTAC CCGTGCAACG GCGGCACCAA CCAGAACTGG
GTGCTGCACC ACAACGAGCT CTACGGCGAG CCCGCGCTGT CGATCAACCA GCGCAGCGGC
TACTGCCTCG ACCAGGAGGC CCCGCGCGGC ACGCCGACCA CGGTGCTCGG CGCGTACCTG
TGCAACGGCG GTCAGAACCA GAAGTGGTAC CTGAACGACT GA
|
|---|
| Protein sequence | MRRWLSVACA AFVALPLGAG IAQAEEPVEQ QDRVGVKVSE ALAGQSSPED FLARASRNDM
SAQAVGNNTI AGRLWNDFNN DGYRGDSESG LSTRVVLLGE VNGVPTETET YSQGNGAYAF
YNLPAGMYQV WVDVKPVSTW LIPTRISVGG DRQRDSDMVG PVALSMPVHF VDDGPAQRGV
DGGFITSEYY YGYSVKNSAS AWCLDQESPQ GFPTTTVGVH HCNNGINQVW DVKWDFTEHL
GIVRFENFSS DYCLDQEYPN GLQTPRVGAY PCNGGTNQNW VLHHNELYGE PALSINQRSG
YCLDQEAPRG TPTTVLGAYL CNGGQNQKWY LND
|
|---|
| |